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Name : hslU (RT0310) Accession : YP_067272.1 Strain : Rickettsia typhi Wilmington Genome accession: NC_006142 Putative virulence/resistance : Unknown Product : ATP-dependent protease ATP-binding subunit HslU Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG1220 EC number : - Position : 391922 - 393274 bp Length : 1353 bp Strand : + Note : heat shock protein involved in degradation of misfolded proteins DNA sequence : ATGAAATCTACTGAAACTACTTGTAAAAAAGATAATATGGGGCTTACCCCTTCTCAAATAGTGAATGAACTTAACAGATT TATTGTAGGTCAAGACAAGGCAAAAAAAGCTGTGGCTATTGCACTTAGAAATCGTTATCGTCGTAAAAGAGTTGAAGGAA ATTTACGTAATGAAATAGTACCAAAAAATATTTTAATGATTGGTTCAACTGGTGTTGGAAAAACAGAAATAGCAAGACGC CTTGCAAAATTGACTAATTCGCCTTTTTACAAAATAGAAGCAACTAAATTTACTGAAGTCGGATACGTTGGGCGTGATGT AGAATCAATAATTCGTGATTTAGTAGAAATAGCTGTTAATACTGAAAAAGCTTTAGCAAAAATAGCAGTAGATATTAATG CTCGTGAAAAAGCGATAGAGAGAATATTAGATAGTTTAGTAGGTAAAACTTCTAGTAGTGAGACTAGAGAAAAATTTAAA GAAAAAGTTTTAAATGGTGAACTTGATGATACGGAAATTGAAATTAGTGTCGCTGATACTACACCTGTTGGTGGTGGAAG TTTTGAAATACCGTGCATACCTGGAGCATCTATGGGTGTTCTTAACCTTGGTGACATGATTGGACGAGCACTTGGCAGTA GTAAGACTAAAACAAAAAAAATGTTAATTAAAGATGCTATGACTGTTATTATACCTGAGGAATCAGAAAAATTAATAGAC CAAGAAAAAATCATTCAGAAAGCTATAAATTTAGCTGAAAATGACGGTATAGTTTTTATTGACGAAATTGATAAAATAGC TTCAACCAGTAATTCAGGAGCCAAAAATGCCGAAGTAAGTCGAGAGGGTGTACAACGAGATTTGCTACCTTTGATAGAAG GTACAACGGTTAATACTAAATATGGGCCAGTTAAAACCGATCATATATTATTTATTGCTTCAGGTGCTTTCCATATTGCT AAACCTTCTGATTTATTACCAGAGTTACAAGGAAGATTACCAATTAGAGTAGAATTAAATTTGCTCACCAAAGATGATAT GATCAAAATATTGCTTGAACCTGAAACTAGTTTAATAAAGCAATATTCGGCATTGATAGGTACTGAAGAAGTACACCTTG AATTTACAGATTCTGCTATTGAGAAGATAGCTGATTATGCAATCACTGTTAATTTAGAGGTAGAAGATATAGGGGCTAGA AGATTGCATACTATACTTGAGAATTTACTTGAGGATATAAGCTTTGAAGCTAGTGAAATGAAAGTCAAAAAAATAATTAT CGATGATAAATTTGTAGAAAATCAATTATCAAAGATAATCACCAATCTTGACTTAGCTAAGTTTGTTCTATAG Protein sequence : MKSTETTCKKDNMGLTPSQIVNELNRFIVGQDKAKKAVAIALRNRYRRKRVEGNLRNEIVPKNILMIGSTGVGKTEIARR LAKLTNSPFYKIEATKFTEVGYVGRDVESIIRDLVEIAVNTEKALAKIAVDINAREKAIERILDSLVGKTSSSETREKFK EKVLNGELDDTEIEISVADTTPVGGGSFEIPCIPGASMGVLNLGDMIGRALGSSKTKTKKMLIKDAMTVIIPEESEKLID QEKIIQKAINLAENDGIVFIDEIDKIASTSNSGAKNAEVSREGVQRDLLPLIEGTTVNTKYGPVKTDHILFIASGAFHIA KPSDLLPELQGRLPIRVELNLLTKDDMIKILLEPETSLIKQYSALIGTEEVHLEFTDSAIEKIADYAITVNLEVEDIGAR RLHTILENLLEDISFEASEMKVKKIIIDDKFVENQLSKIITNLDLAKFVL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hslU | YP_003728753.1 | heat shock protein HslU | Not tested | cag PAI | Protein | 2e-89 | 46 |
