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Name : DP0593 (DP0593) Accession : YP_064329.1 Strain : Desulfotalea psychrophila LSv54 Genome accession: NC_006138 Putative virulence/resistance : Virulence Product : polysaccharide biosynthesis protein vipA/tviB Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG0677 EC number : - Position : 650224 - 651495 bp Length : 1272 bp Strand : + Note : - DNA sequence : GTGAACAGAAAGATAGAAATTGCCGTCATTGGCTTAGGCTACGTAGGACTTCCCCTTGCCGTTGAATTTGGCAAAATATA TCCTGTTATTGGTTTTGACCATAACCCCGTCCGCATATCCGAGCTCCAGGCAGGTAATGACATCACCATGGAGCTGACAG CAGAAGAGCTTGCTCTTGGCCAGCAGCTCTCCTTTTCAGCAGATGCACAGGACCTTGGCCGCTGTAATGTCTATATTATC ACCGTACCAACTCCCATTGATAAAAACAAAAAACCCGATCTTGGCCCCCTGCTCAACGCCAGTCAGGAGGTGGGCAAGGT GCTGCAAGAGGGTGATGTGGTGATCTATGAATCAACGGTCTACCCAGGTGCCACCGAAGAGGACTGCGTTCCTGTTTTAG AGTCGGTTTCCGACCTCACCTTTAACAGAGACTTTTTCGTGGGCTATAGCCCTGAACGGGTTAATCCCGGAGATAAAAAA CATAGGGTAACCACTATTCAAAAGGTCACCTCCGGCTCAACTAGCGAAACCGCCGACTTTGTTGATAGCCTCTACAAGAA GATCATCATCGCCGGCACCCATAGGGCCAGCAGTATAAAGGTGGCCGAGGCGGCAAAGGTCATCGAGAATACCCAGCGAG ATGTCAACATCGCCCTGGTCAATGAACTTGCCCTGATCTTTAACCGCATGGAGATAGACACGGAAGAGGTGCTGGAGGCG GCCGGCACCAAGTGGAATTTCCTCCCCTTTCGTCCCGGCCTGGTGGGTGGACACTGCATCGGTGTTGATCCATACTATCT CACCCACAAGGCCCAGGAACTTGGTTACCACCCTGAAATTATCCTTGCCGGCAGGCGCATCAACGATGGGGTCGGCAGCT ATGTGGCCGCAGAACTGGTCAAGGCAATGCTCAAGAAAAAGTGTCCCATGGGAAGCGCCCGGGTACTGATCATGGGCCTC TCCTTCAAGGAAAACTGCCCGGACATCCGTAACTCCAAGGTCATTGATATCATCAAAGAACTACAGAGCTTTGGCATAGA GGTAGATGCCTATGATCCCTGGGTGCAGAGATCTCAGGCCGAAAGAGCCTATGGCATCAGCCCCATTGAAGCACCCGCTC CCAAAAGCTACGACGGTATCGTCCTGGCCGTGGGTCATCGGGATTTTGCCCAAATGGGTGCCGAAGCCATCCACGCCCTC GGCAAAACACCCCATGTTCTCTATGATATTAAGTGCCTACTCCCCAGCGACCAGGTAGACCTACGCCTATAG Protein sequence : MNRKIEIAVIGLGYVGLPLAVEFGKIYPVIGFDHNPVRISELQAGNDITMELTAEELALGQQLSFSADAQDLGRCNVYII TVPTPIDKNKKPDLGPLLNASQEVGKVLQEGDVVIYESTVYPGATEEDCVPVLESVSDLTFNRDFFVGYSPERVNPGDKK HRVTTIQKVTSGSTSETADFVDSLYKKIIIAGTHRASSIKVAEAAKVIENTQRDVNIALVNELALIFNRMEIDTEEVLEA AGTKWNFLPFRPGLVGGHCIGVDPYYLTHKAQELGYHPEIILAGRRINDGVGSYVAAELVKAMLKKKCPMGSARVLIMGL SFKENCPDIRNSKVIDIIKELQSFGIEVDAYDPWVQRSQAERAYGISPIEAPAPKSYDGIVLAVGHRDFAQMGAEAIHAL GKTPHVLYDIKCLLPSDQVDLRL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tviB | NP_807945.1 | VI polysaccharide biosynthesis UDP-glucose/GDP-mannose dehydrogenase | Virulence | SPI-7 | Protein | 3e-135 | 63 |
| tviB | NP_458740.1 | Vi polysaccharide biosynthesis protein, UDP-glucose/GDP-mannose dehydrogenase | Virulence | SPI-7 | Protein | 3e-135 | 63 |
| cap1L | AAA64651.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 1e-110 | 56 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| DP0593 | YP_064329.1 | polysaccharide biosynthesis protein vipA/tviB | VFG0431 | Protein | 1e-135 | 63 |
