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Name : DP0523 (DP0523) Accession : YP_064259.1 Strain : Desulfotalea psychrophila LSv54 Genome accession: NC_006138 Putative virulence/resistance : Virulence Product : general secretion pathway protein E Function : - COG functional category : N : Cell motility COG ID : COG2804 EC number : - Position : 570128 - 571651 bp Length : 1524 bp Strand : - Note : - DNA sequence : ATGAATATTGTCACCAAGACAATCCCCTATAGCTTTGCCTCCCGCCATCTTATTGTGCCCATAGAGCAAAAGGGGACTCA TCTTAAGGTGGCCGTTTATCATCCCGATAGTAAGGATGTCCTGCATGATATTGAGCAGGCAAATCAGCTTCAGGTTTCCG CCTGTCTGGCCACTAAGGCAGATATACGGAAAATACTGTCGGAATTTTTTGGTTTTCAACGCTCTATCTCGGCGGCAGAG AGTCAATGTGGCTCCTTCCGGGATGATATGTCTGTGGATATAGGCAATCTTGAGAGGTATGTGAAGATATCTTCCACCAA GGAGCTGACCTCTTCTGATCAGCATATAAAGTCTGCTCTGAACCATATCTTTCAGTATGCCCTGGATCAGCGGGCCAGTG ATATCCATGTTGAGCCCAAACGGGAAACGACCATGGTCCGTTTTCGTATAGATGGGGCCCTCCATATCATCTATACCCTG CCCAAGGCCGTTCACTCTGCCCTGATCTCTCGGATAAAATTTTTAGCCCGTCTCGATATTGCAGAAAAACGAAGACCACA GGATGGCCGTATTAAACTGGGAGCTAAGAATAATCTGGAGGTTGAGGTGCGGGTGTCGACGGTGCCCGTCTCCTTTGGCG AAAAGGTGGTGATGCGTATCCTTGATCCCTCGGTCATCTTTCAGGATATTTCGGGCCTTGGTCTCTCTCCCCGTGATTTG CATGTCTATAATAGTTGTATAGCTGCCCCCCACGGTATCTTCCTGGTGACCGGGCCGACGGGTAGTGGTAAATCGACGAC CCTCTACTCCACCCTCAAGGCTATCTCCAGCTCAGAGAAGAATATTGTCACCGTTGAAGATCCTGTGGAGATGGTCTATG AGGAGTTTAATCAAATTGCCGTTCAGCCACTGATCGACGTCACCTTCTCAACCATTCTGCGTAATATTCTCCGGCAGGAT CCCGATATTATTATGATCGGGGAGATTCGTGATCATGAAACAGCGGCCCATGCGGTCCAGGCGGCCATGACCGGCCATCT GGTCTTTTCCACCCTTCATACCAACGATGCCGCCAGTGCAGTGGCCCGTCTTGAGGATCTGGGCCTGCAACCATTTATGA TTGCCTCCACCCTGCTTGGCTGTATGGCCCAACGTCTGGTCAAGACTATTTGCACCTCCTGTGCCGAGGAGTATTCGGTG AGTTGTCAGGAGCTGCGGCGGATGGGCTTTCCTGTCGAGGGCGATGGCGAGATGCGTTTGAAGAGGGGCAAGGGCTGTCG GGAGTGCCGTGGTACCGGCTATAGAGGCAGATGTGGCATCTTCGAGATTTTTCCTGTATCACCGCCCCTGAAACGGTTGA TTGGTACTGGTGAGCTGGGTGGCGATGTAGAACAGCTTGCAATTCGTGAGGGAATGACTACCTTAAGAGAGGATGCTTGG CAGAAGGTACAGGCAGGGATAACCACTTGCGAAGAAGTCCTGCGGGTCACCTCCGATGATAATTTTAAACCCTTCAGCGC CTAG Protein sequence : MNIVTKTIPYSFASRHLIVPIEQKGTHLKVAVYHPDSKDVLHDIEQANQLQVSACLATKADIRKILSEFFGFQRSISAAE SQCGSFRDDMSVDIGNLERYVKISSTKELTSSDQHIKSALNHIFQYALDQRASDIHVEPKRETTMVRFRIDGALHIIYTL PKAVHSALISRIKFLARLDIAEKRRPQDGRIKLGAKNNLEVEVRVSTVPVSFGEKVVMRILDPSVIFQDISGLGLSPRDL HVYNSCIAAPHGIFLVTGPTGSGKSTTLYSTLKAISSSEKNIVTVEDPVEMVYEEFNQIAVQPLIDVTFSTILRNILRQD PDIIMIGEIRDHETAAHAVQAAMTGHLVFSTLHTNDAASAVARLEDLGLQPFMIASTLLGCMAQRLVKTICTSCAEEYSV SCQELRRMGFPVEGDGEMRLKRGKGCRECRGTGYRGRCGIFEIFPVSPPLKRLIGTGELGGDVEQLAIREGMTTLREDAW QKVQAGITTCEEVLRVTSDDNFKPFSA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 4e-74 | 41 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 3e-74 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| DP0523 | YP_064259.1 | general secretion pathway protein E | VFG0182 | Protein | 2e-79 | 45 |
| DP0523 | YP_064259.1 | general secretion pathway protein E | VFG2426 | Protein | 6e-66 | 42 |
| DP0523 | YP_064259.1 | general secretion pathway protein E | VFG2048 | Protein | 4e-74 | 41 |
