Gene Information

Name : fliP (DP2671)
Accession : YP_066407.1
Strain : Desulfotalea psychrophila LSv54
Genome accession: NC_006138
Putative virulence/resistance : Virulence
Product : flagellar biosynthesis protein FliP
Function : -
COG functional category : N : Cell motility
COG ID : COG1338
EC number : -
Position : 3033515 - 3034297 bp
Length : 783 bp
Strand : +
Note : FliP, with proteins FliQ and FliR, forms the core of the central channel in the flagella export apparatus

DNA sequence : 
ATGAACAAGACCTTGAAATCACCCAATAGCGCCAAAAGCAAATATCTCTATATCCTCTTTCTGGCAACTATCTCTCTGCT
GACAAGCAGTCATCCCTCATGGGCCGTTGGTCTACCCAATATCACCCTGGGCCTGGAAGATGCCGACTCACCAGAAAAGG
TCTCAGCTGCCCTGCAGATTCTCTTTGTTCTTACTATAATTTCTGTCGCCCCAGCAATCGTCCTGATGATGACCTGCTTT
ACCCGCATTGTCATCGTCCTTGGTTTTGTTCGCCAGGCCATGGGCACTCAAAATATGCCCCCAAACCAAATTGTCATTGG
TTTCGCCCTATTTCTTACCTTCTTTATCATGTCGCCTACCATAAACAAAATAAACGACACAGCCCTTCAACCATATCTGG
CAAAAGAGATCAGCCAAGGTAAAGCTCTGGATCTCACCGTGTTCTCCATGCGAGAGTTTATGTTCAGTCAGGTGCAGGAA
TCTGAGCTGAGCTTTATGGCTGAGTTAACCATTGAAAAAGAGCCTAAGGACAAGGCTGACATCCCGACCACCACCCTTAT
TCCTGCCTATATGCTCTCTGAGCTTAAGACAGCCTTTAGCATGGGGTTTATGGTATATATCCCCTTCCTTGTTATTGATA
TGATTGTGGCCTCGGTGCTGATGTCCATGGGTATGATGATGCTTCCACCTGTTATTATCTCCATGCCATTTAAACTTCTG
CTCTTTATCCTGGTAGATGGTTGGACTCTTATCGTTGGCTCCCTTGTTAAAAGTTTTGGTTAA

Protein sequence : 
MNKTLKSPNSAKSKYLYILFLATISLLTSSHPSWAVGLPNITLGLEDADSPEKVSAALQILFVLTIISVAPAIVLMMTCF
TRIVIVLGFVRQAMGTQNMPPNQIVIGFALFLTFFIMSPTINKINDTALQPYLAKEISQGKALDLTVFSMREFMFSQVQE
SELSFMAELTIEKEPKDKADIPTTTLIPAYMLSELKTAFSMGFMVYIPFLVIDMIVASVLMSMGMMMLPPVIISMPFKLL
LFILVDGWTLIVGSLVKSFG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
escR AFO66317.1 putative LEE-encoded type III secretion system factor Virulence SESS LEE Protein 6e-29 41
escR AFO66400.1 putative LEE-encoded type III secretion system factor Virulence SESS LEE Protein 6e-29 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fliP YP_066407.1 flagellar biosynthesis protein FliP VFG2338 Protein 7e-47 52
fliP YP_066407.1 flagellar biosynthesis protein FliP VFG1259 Protein 1e-54 50
fliP YP_066407.1 flagellar biosynthesis protein FliP VFG2016 Protein 3e-52 48
fliP YP_066407.1 flagellar biosynthesis protein FliP VFG2494 Protein 1e-47 45