|
Name : DP1910 (DP1910) Accession : YP_065646.1 Strain : Desulfotalea psychrophila LSv54 Genome accession: NC_006138 Putative virulence/resistance : Virulence Product : heat shock protein ClpB Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 2151128 - 2153734 bp Length : 2607 bp Strand : + Note : - DNA sequence : ATGCAACTTGATAAGTTTACCCTTAAGTCTCAGGAGGCCGTTCAGGCCGCCCAGCAGCAGGCAAGACAGATGGGGCATCA GGAAATTCATCTCAGCCATCTAGTCCTTGCCATACTGCAACAAACCGACAGCATTATTATTCCCGTTCTCAAAAAAATGG GTGTTCAGCCGCATATGTTAGAGGTGGCTTTGCAGGAGGCCCTTGCTGCTATACCTAAGGTCTCCGGCAGTGGAGCGGGC CAGGTCTACGCCTCTCAGGCCCTGACTACCCTCTTTGACTCGGCCAGTGATATTGCCTCATCCATGCAGGACGATTTTGT CAGTATGGAACATATTTTCCTTGCCGCCCTACGGGTAAAAAAAGATGCTGTTGCAGATGTTTTTAAAAGAAATCAGGTGA GTGAAAAACAGTTCCTTCAGGCCCTGATGGATATTAGGGGTAATCAAAGGGTTACTGATCAATCTCCTGAAGAGAAATTT CAGGCTCTGCAAAAATATGCCGATAATCTTACCGATAGGGCAAAACAGGGCAAGATTGATCCTGTCATTGGTCGTGACGA AGAGATACGTAGGGTTATTCAGGTTCTTTCTAGACGTACCAAGAATAATCCTATTCTCATAGGTGAACCGGGTGTTGGTA AGACTGCCATCGTTGAGGGACTGGCCCAACGGATTGTTGACGATGATATTCCCACCACCCTGAAGAATAAGCAGGTTGTT ACCCTGGATATGGGCGCTCTTATTGCCGGAGCGAAGTATCGGGGTGAATTTGAAGACCGTCTTAAGGCGGTGCTTAAAGA GGTGGAGAAGCAGGCGGGGAATATCATTCTCTTTATTGATGAGCTTCATACCATTGTCGGGGCCGGTGCCTCGGAGGGAT CAATGGATGCCTCCAATATGCTAAAACCTGCCCTGGCTCGGGGGGAGTTGCACTGCGTAGGTGCCACCACTCTCAACGAA TATAAGAAGTACATTGAAAAAGACACCGCCCTTGAACGAAGGTTCCAACCCGTTCTTGTCCAGGAACCCAGTGTTGAGGA TACCGTGGCTATCCTCCGTGGGATTAAGGAGAAGTATGAGATACACCATGGTGTCCGTATTCAGGATGCGGCCACCGTTG CGGCGGTAACCCTTTCTAATCGTTATATTGCAGATCGTTTTCTCCCCGATAAGGCCATTGACCTCATCGATGAGGCGGCT TCGCAACTGCGGATTGAGATAGATTCTATGCCAACGGAGATTGATCAGCTCCAACGCAAATGTATGAAGCTTGAGATAGA GCAGGAGGCTTTGAAGAAGGAGAAGGATTCAGCCTCTATCTCCAGGCTTCAGGAGAGTAAGAAGCAACTCGCTGATCTCA GTGATGAGCTTAAAGGACTCATGGGCCAGTGGAATATTGAAAGGGAGACCATTGCCGGTATCTCCTCGATAAAAGAGGAA ATTGATGCTGCCCAGGCAGAAGAACAGCTGGCGGAACGGGCAGGAGATTTGCAGAAAGTTGCCCAGATACGTTACCAAAA GCTTCCGGGGCTTGGAGAGAAGTTGGTGAAGGCGCAAGCTGAGTTGAGCACCATGCAGCAGGATAAGATGATTCTCAAAG AGGAGGTCGGGCCAGAGGATATTGCCTCCATTGTCAGCAAATGGACAGGAATTCCTGTGGATAAACTTCTTCAGGGAGAG CGTGATAAGCTTGTGCATGCAGAAGATGATCTGGCAAAACGTGTTGTAGGTCAAAGGGATGCTATTGTTGCAGTGGCAAA TGCTGTGCGCAGATCTCGGGCGGGCCTGCAAAACCCAAATAGGCCTCTTGGTTCCTTTCTCTTTTTGGGCCCCACCGGTG TCGGCAAGACCGAGCTTGCCAAATCTCTTGCCGACTTTCTCTTTGAAGATGAGCAGGCCATGATTCGGGTGGACATGTCT GAGTATATGGAGAGGCACGCTGTCTCCCGGCTGATCGGAGCTCCTCCCGGCTATGTTGGTTATGATGAGGGTGGCTATCT CACCGAGGCTATTCGGCGCAGACCTTATGCCGTTATTCTTTTGGATGAAATTGAAAAGGCCCATCCAGATGTATTCAATA TTCTTTTGCAAATACTGGACGATGGTCGACTCACCGATGGTAAGGGGCGTACGGTTGATTTTCGTAACACCATCCTCATT ATGACCTCTAATATAGGTGGAGAGCAAATTCTGGAGATGGTTCAGGCTGGAAAAGGGGCCGCGGATATGTACGAACAGAT AAATACCATGCTGCAGTCTCGCTTTAAACCGGAGTTTCTTAATAGGATTGATGACAGCATTATCTTTAATCCGCTGAGTC GTGAGGATATGCTCAGTATTCTTGATATTCAGCTTATAGGTTTGGCAGGTCGTCTTCTCGAAAGAGATATTGTTTTACAG GTAGAGAAAAATGCCAAGGAGCTCCTTGTTGCCAGAGGATACGACAGGGCCTATGGCGCTCGGCCCTTGAAACGGTCAAT CCAGCGTTATCTTGAAGACCCCCTGGCCTTGACGATTCTGGCGGGGGAGATAAAGACGCCTGCAAAATTGGTCGTAGGTC TTGAAAATGGTGAATTGCTTATGCGCTGGGCTGAGTTAACAGAGTAA Protein sequence : MQLDKFTLKSQEAVQAAQQQARQMGHQEIHLSHLVLAILQQTDSIIIPVLKKMGVQPHMLEVALQEALAAIPKVSGSGAG QVYASQALTTLFDSASDIASSMQDDFVSMEHIFLAALRVKKDAVADVFKRNQVSEKQFLQALMDIRGNQRVTDQSPEEKF QALQKYADNLTDRAKQGKIDPVIGRDEEIRRVIQVLSRRTKNNPILIGEPGVGKTAIVEGLAQRIVDDDIPTTLKNKQVV TLDMGALIAGAKYRGEFEDRLKAVLKEVEKQAGNIILFIDELHTIVGAGASEGSMDASNMLKPALARGELHCVGATTLNE YKKYIEKDTALERRFQPVLVQEPSVEDTVAILRGIKEKYEIHHGVRIQDAATVAAVTLSNRYIADRFLPDKAIDLIDEAA SQLRIEIDSMPTEIDQLQRKCMKLEIEQEALKKEKDSASISRLQESKKQLADLSDELKGLMGQWNIERETIAGISSIKEE IDAAQAEEQLAERAGDLQKVAQIRYQKLPGLGEKLVKAQAELSTMQQDKMILKEEVGPEDIASIVSKWTGIPVDKLLQGE RDKLVHAEDDLAKRVVGQRDAIVAVANAVRRSRAGLQNPNRPLGSFLFLGPTGVGKTELAKSLADFLFEDEQAMIRVDMS EYMERHAVSRLIGAPPGYVGYDEGGYLTEAIRRRPYAVILLDEIEKAHPDVFNILLQILDDGRLTDGKGRTVDFRNTILI MTSNIGGEQILEMVQAGKGAADMYEQINTMLQSRFKPEFLNRIDDSIIFNPLSREDMLSILDIQLIGLAGRLLERDIVLQ VEKNAKELLVARGYDRAYGARPLKRSIQRYLEDPLALTILAGEIKTPAKLVVGLENGELLMRWAELTE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| aec27 | YP_851418.1 | ATPase | Not tested | PAI II APEC-O1 | Protein | 2e-104 | 41 |
| aec27 | AAQ96721.1 | Aec27 | Not tested | AGI-1 | Protein | 2e-104 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| DP1910 | YP_065646.1 | heat shock protein ClpB | VFG2076 | Protein | 2e-115 | 42 |
