Gene Information

Name : DP1627 (DP1627)
Accession : YP_065363.1
Strain : Desulfotalea psychrophila LSv54
Genome accession: NC_006138
Putative virulence/resistance : Resistance
Product : lipoprotein releasing system ATP-binding protein (LolD)
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1811785 - 1812459 bp
Length : 675 bp
Strand : -
Note : -

DNA sequence : 
ATGACCCTTTATACAGCAAAAGACATCAGCAAAAATTACCAGAGTGGCGATGAGATCCTCCCCGTCTTAAAAGGGATCAA
TCTCTCCATTGAACACAGCACCATGACCGCCATTGTCGGAGCCTCGGGCTCGGGCAAGACGACCCTGCTCCAGATACTGG
GCACCCTGACTAAACCAAGCAGTGGCAAGCTCTACTTCAAAGAGTGCGCGGTGGATGAGAAAAACGAAAGAGAGCTTGCC
GCCTTCCGCAATGCCTCCCTTGGCTTTATCTTTCAATTTCACCACCTCTTGCCCGAATTCACCACTCTGGAAAACGTCAT
GATGCCCGCCCTTATCGGCGGCAAAAACAATGCCGAATCAAGGGCTAATGCAGAAGATCTTCTTCGTCGGGTAGAACTGC
ATCACCGCCTGGAGCACAAGGTAACCAATCTCTCCGGTGGTGAACAGCAGAGGACGGCCCTGGCCCGAGCCCTGATCATG
AACCCCGCCATCCTCCTGGCCGATGAGCCCACGGGAAACCTTGATAGCAGATCTGGAGAGATCGTCTTTGATCTCCTCAA
AAACCTCGGACAGGAACGACAACTGGCGACCATTATGGTAACCCATAACAATGAACTTGCTGCCCGCATGGATCGTTGCG
TAACCCTTCTCGACGGTAGCTTGCAAGAAGAATAA

Protein sequence : 
MTLYTAKDISKNYQSGDEILPVLKGINLSIEHSTMTAIVGASGSGKTTLLQILGTLTKPSSGKLYFKECAVDEKNERELA
AFRNASLGFIFQFHHLLPEFTTLENVMMPALIGGKNNAESRANAEDLLRRVELHHRLEHKVTNLSGGEQQRTALARALIM
NPAILLADEPTGNLDSRSGEIVFDLLKNLGQERQLATIMVTHNNELAARMDRCVTLLDGSLQEE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-26 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-27 41
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-27 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 5e-27 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
DP1627 YP_065363.1 lipoprotein releasing system ATP-binding protein (LolD) NC_012469.1.7686878. Protein 5e-33 43