Gene Information

Name : glnA (Lxx10080)
Accession : YP_061980.1
Strain : Leifsonia xyli CTCB07
Genome accession: NC_006087
Putative virulence/resistance : Virulence
Product : glutamine synthetase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0174
EC number : -
Position : 1029620 - 1031044 bp
Length : 1425 bp
Strand : -
Note : identified by sequence similarity

DNA sequence :
ATGTTCCGCGATTCTTCTGAGGTGCTCAAGTACATCAAGGAGACCGACGTCAAGTTCCTTGACATCCGCTTCACCGATTT
GCCGGGTGTTCAGCAGCACTTCAACATCCCCGCCGCGACCGTCGATGAGGAATTCTTCTCGGTCGGCCAGCTCTTCGATG
GCTCATCCATCCGGGGATTCGCGTCGATCCACGAATCCGACATGCAGTTGATCCCGGATGTGTCGACCGCCTACATCGAC
CCGTTCCGGCACGAGCGCACGCTCATCATGGTTTTCGACATTTACAATCCACGCAACGGCGATATCTACGCGAAGGACCC
ACGCCAGGTCGCCAAGAAGGCCGAGAAGTACCTGGCCACGGCCGGTATCGCCGACACCGCGTTCTTCGCCCCCGAAGCCG
AGTTCTACATCTTCGACGATGTGCGCTACGAGGTGAAGCAGAACGCGATCTTCTACGCGGTGGACTCCAGCGAGGGCGCG
TGGAACTCCGGCCGCGAGGAGGAGGGCGGCAACCTCGCCAACAAGACCCCGTACAAGGGCGGCTACTTCCCGGTCTCACC
GGTGGACCAGCACGCCGATCTGCGCGACGACATCGTCCTCAAGCTGGTCGAGGCAGGGCTTGAGGTCGAGCGCTCGCACC
ACGAGGTCGGCACGGCCGGCCAGGGCGAGATCAACTACAAGTTCGACACCATGGTGTCGGCCGCCGACGACATCCTCAAG
TTCAAATACATCGTGAAGAACACCGCTAACGAGTGGGGAAAGACGGCGACGTTCATGCCCAAGCCGCTCTTCGGCGACAA
CGGCTCCGGGATGCACACCCACCAGTCCCTGTGGAACGACGGCAAGCCGCTGTTCTACGACGAGGCCGGCTACGGCGCGC
TCTCCAACATCGCGCGCTGGTACATCGGCGGTCTGCTCAAGCACGCCCCGGCCGTGCTCGCCTTCACGAACCCGACGGTG
AACTCGTTCCACCGGCTCGTGCCCGGCTTCGAGGCCCCGGTCAACCTGGTCTACTCGGCCGGCAACCGCTCGGCGTCCAT
CCGCATCCCGATCACCGGCTCCAACCCGAAGGCCAAGCGCATCGAGTTCCGCGCGCCGGACGCTTCGGGCAACCCCTACC
TCGCCTTCGCTGCGCAGCTCATGGCCGGCATCGATGGCATCAAGAACCGCATCGAACCGCACGAACCGGTCGACAAGGAC
CTCTACGAGCTGCCGCCCGAGGAGGCGCGCAACATCCCGCAGGTCCCGGCTTCGCTCGGTGAGGCGCTCGACGCGCTGGA
AGCCGACCACGACTTCCTCACAGCGGGCGGCGTGTTCACCCCCGAGCTGATCGAGACGTGGATCGAGTACAAGCGCGAGA
AAGAGATCAAACCGCTGGCGCAGCGCCCGCACCCGTTCGAGTACGAGCTGTACTACGGGGTGTGA

Protein sequence :
MFRDSSEVLKYIKETDVKFLDIRFTDLPGVQQHFNIPAATVDEEFFSVGQLFDGSSIRGFASIHESDMQLIPDVSTAYID
PFRHERTLIMVFDIYNPRNGDIYAKDPRQVAKKAEKYLATAGIADTAFFAPEAEFYIFDDVRYEVKQNAIFYAVDSSEGA
WNSGREEEGGNLANKTPYKGGYFPVSPVDQHADLRDDIVLKLVEAGLEVERSHHEVGTAGQGEINYKFDTMVSAADDILK
FKYIVKNTANEWGKTATFMPKPLFGDNGSGMHTHQSLWNDGKPLFYDEAGYGALSNIARWYIGGLLKHAPAVLAFTNPTV
NSFHRLVPGFEAPVNLVYSAGNRSASIRIPITGSNPKAKRIEFRAPDASGNPYLAFAAQLMAGIDGIKNRIEPHEPVDKD
LYELPPEEARNIPQVPASLGEALDALEADHDFLTAGGVFTPELIETWIEYKREKEIKPLAQRPHPFEYELYYGV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glnA YP_003728749.1 glutamine synthetase Not tested cag PAI Protein 1e-92 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
glnA YP_061980.1 glutamine synthetase VFG1399 Protein 5e-149 62