Gene Information

Name : spaF (Lxx08750)
Accession : YP_061875.1
Strain : Leifsonia xyli CTCB07
Genome accession: NC_006087
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1131
EC number : -
Position : 884739 - 885650 bp
Length : 912 bp
Strand : -
Note : identified by sequence similarity

DNA sequence :
ATGATCCATCTCGACCGCCTCACCAAGACGTTCGACCAGAAGACGGCCGTCGACGACATCACGGCGACCATCCAGCCCGG
CAAGGTCACGGGCTTCCTCGGTCCGAACGGTGCCGGAAAGTCTACGACCATGCGCATGATCATGGGCCTCGACCGCCCCA
CCAAGGGCGCTGCCACCATCAACGGCAAACGGTACGCGGAGTTGCGCTCACCGCTGACCGAGGTCGGCGCGCTGCTCGAT
GCGAAAGCCGTACACACCGACCGCACCGCCTACAATCACCTGCTCGCGCTGGCCGCGACCCACGGCATCCCGAAGCGCCG
CGTGGAGGAGGTGGTCGGCCTCACCGGTCTGGAGTCCGTGGCGGGCAAGCGCGTCGGCGGATTCTCGCTCGGGATGGGGC
AGCGCCTCGGCATCGCCGCCGCGATGCTCGGCGATCCGGCGACGCTCATCCTCGACGAGCCGGTCAACGGCCTCGACCCG
GAGGGAGTGCTCTGGGTGCGCCAGTTCGCACGGCACCTCGCCGGGCAGGGCCGGACGGTGTTCCTTTCCTCGCACCTCAT
GAGCGAGATGGCGCAGACGGCCGATCACATCATCGTCCTCGGCCGTGGCCGCATCCTGGCCGACGCCCCGGTCGGCGATA
TCCTCGCCGGAGCGACTCGCAACGCGGTCCGCGTGCGCACGCCGCAGGTCGACCAGCTCGCACACGCAATCGCCGCGCCG
GACGTCACGATCACGGGAGTTGAAGCTCAGCTCATCGAGGTCACCGGCCTCTCGTCCGCCCAGATCGGCGACCTGGCCGC
CGCCACCGGCGTCGTGCTCCACGAACTCACCCCCATCAGCGCCTCCCTGGAGGAGGCGTACCTCGAACTCACGCAGGACG
AGGTCGAATACCACTCGGAGATCTCCCGATGA

Protein sequence :
MIHLDRLTKTFDQKTAVDDITATIQPGKVTGFLGPNGAGKSTTMRMIMGLDRPTKGAATINGKRYAELRSPLTEVGALLD
AKAVHTDRTAYNHLLALAATHGIPKRRVEEVVGLTGLESVAGKRVGGFSLGMGQRLGIAAAMLGDPATLILDEPVNGLDP
EGVLWVRQFARHLAGQGRTVFLSSHLMSEMAQTADHIIVLGRGRILADAPVGDILAGATRNAVRVRTPQVDQLAHAIAAP
DVTITGVEAQLIEVTGLSSAQIGDLAAATGVVLHELTPISASLEEAYLELTQDEVEYHSEISR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSU98_0915 YP_001200473.1 transport ATP-binding protein Not tested 89K Protein 2e-46 46
SSU05_0910 YP_001198276.1 transport ATP-binding protein Not tested 89K Protein 2e-46 46
Spaf_1095 YP_006309897.1 ABC multidrug transporter Not tested FWisland_1 Protein 7e-46 45
Spaf_1123 YP_006309925.1 putative transport ATP-binding protein Not tested FWisland_1 Protein 1e-47 44