|
Name : spaF (Lxx08750) Accession : YP_061875.1 Strain : Leifsonia xyli CTCB07 Genome accession: NC_006087 Putative virulence/resistance : Resistance Product : ABC transporter ATP-binding protein Function : - COG functional category : V : Defense mechanisms COG ID : COG1131 EC number : - Position : 884739 - 885650 bp Length : 912 bp Strand : - Note : identified by sequence similarity DNA sequence : ATGATCCATCTCGACCGCCTCACCAAGACGTTCGACCAGAAGACGGCCGTCGACGACATCACGGCGACCATCCAGCCCGG CAAGGTCACGGGCTTCCTCGGTCCGAACGGTGCCGGAAAGTCTACGACCATGCGCATGATCATGGGCCTCGACCGCCCCA CCAAGGGCGCTGCCACCATCAACGGCAAACGGTACGCGGAGTTGCGCTCACCGCTGACCGAGGTCGGCGCGCTGCTCGAT GCGAAAGCCGTACACACCGACCGCACCGCCTACAATCACCTGCTCGCGCTGGCCGCGACCCACGGCATCCCGAAGCGCCG CGTGGAGGAGGTGGTCGGCCTCACCGGTCTGGAGTCCGTGGCGGGCAAGCGCGTCGGCGGATTCTCGCTCGGGATGGGGC AGCGCCTCGGCATCGCCGCCGCGATGCTCGGCGATCCGGCGACGCTCATCCTCGACGAGCCGGTCAACGGCCTCGACCCG GAGGGAGTGCTCTGGGTGCGCCAGTTCGCACGGCACCTCGCCGGGCAGGGCCGGACGGTGTTCCTTTCCTCGCACCTCAT GAGCGAGATGGCGCAGACGGCCGATCACATCATCGTCCTCGGCCGTGGCCGCATCCTGGCCGACGCCCCGGTCGGCGATA TCCTCGCCGGAGCGACTCGCAACGCGGTCCGCGTGCGCACGCCGCAGGTCGACCAGCTCGCACACGCAATCGCCGCGCCG GACGTCACGATCACGGGAGTTGAAGCTCAGCTCATCGAGGTCACCGGCCTCTCGTCCGCCCAGATCGGCGACCTGGCCGC CGCCACCGGCGTCGTGCTCCACGAACTCACCCCCATCAGCGCCTCCCTGGAGGAGGCGTACCTCGAACTCACGCAGGACG AGGTCGAATACCACTCGGAGATCTCCCGATGA Protein sequence : MIHLDRLTKTFDQKTAVDDITATIQPGKVTGFLGPNGAGKSTTMRMIMGLDRPTKGAATINGKRYAELRSPLTEVGALLD AKAVHTDRTAYNHLLALAATHGIPKRRVEEVVGLTGLESVAGKRVGGFSLGMGQRLGIAAAMLGDPATLILDEPVNGLDP EGVLWVRQFARHLAGQGRTVFLSSHLMSEMAQTADHIIVLGRGRILADAPVGDILAGATRNAVRVRTPQVDQLAHAIAAP DVTITGVEAQLIEVTGLSSAQIGDLAAATGVVLHELTPISASLEEAYLELTQDEVEYHSEISR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SSU05_0910 | YP_001198276.1 | transport ATP-binding protein | Not tested | 89K | Protein | 2e-46 | 46 |
| SSU98_0915 | YP_001200473.1 | transport ATP-binding protein | Not tested | 89K | Protein | 2e-46 | 46 |
| Spaf_1095 | YP_006309897.1 | ABC multidrug transporter | Not tested | FWisland_1 | Protein | 7e-46 | 45 |
| Spaf_1123 | YP_006309925.1 | putative transport ATP-binding protein | Not tested | FWisland_1 | Protein | 1e-47 | 44 |
