Gene Information

Name : chiR (Lxx08730)
Accession : YP_061872.1
Strain : Leifsonia xyli CTCB07
Genome accession: NC_006087
Putative virulence/resistance : Unknown
Product : two-component system regulatory protein
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG2197
EC number : -
Position : 881967 - 882644 bp
Length : 678 bp
Strand : -
Note : identified by sequence similarity

DNA sequence :
GTGACCGATCAGCGCCCGCTGCGCATCCTGCTCGCCGACGACCAGGCGCTGGTGCGCCTGGGTTTCCGCATGGTGCTGGA
GGCGGAACCCGGCCTCTGCGTCGTCGGTGAGGCCATCGACGGCGTCGAGGCGGTGCGGCTGGCCGTGGAGACCCGGCCCG
ATGTCATCCTGATGGATGTGCGGATGCCCGCGCTGGACGGGATCGAGGCCACACGGCGCATCGTGGCTGCCAACCCGGAA
GCGCGGATCATCATTCTGACGACCTTCGACCTCGACGAGTACGCCTTCGGCGGACTGCGCGCCGGCGCGAGCGGTTTCCT
CCTGAAAGACGCCCGGCCAGACGATTTGACGGCGGCGATCCGCGCCGTGGCCGCGGGCGACGCGGCCGTCTCCGGCCGCG
TGACCCGGGCCATGCTGGAGCTGTTCGCCGACCGGCTGCCCACGACGACGGAGAGCGCCGCGCCCGGCGGCGACCCAGCA
GCGGCCCTCACACCCCGGGAGCGCGAGATCTTGCTGGCGATCGCGGACGGGCTGACCAATGGCGAGATCGGCGCGACATT
CCACCTGACCGAGTCGACCGTGAAGACGCATGTCGGGCGTGTGCTGTCGAAACTGCACCTGCGCGACCGTGTGCATGCCG
TGATCTTCGCGTATGACAACGGTCTCATCGACTGCTGA

Protein sequence :
MTDQRPLRILLADDQALVRLGFRMVLEAEPGLCVVGEAIDGVEAVRLAVETRPDVILMDVRMPALDGIEATRRIVAANPE
ARIIILTTFDLDEYAFGGLRAGASGFLLKDARPDDLTAAIRAVAAGDAAVSGRVTRAMLELFADRLPTTTESAAPGGDPA
AALTPREREILLAIADGLTNGEIGATFHLTESTVKTHVGRVLSKLHLRDRVHAVIFAYDNGLIDC

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
regB YP_001220830.1 putative two-component system response regulator Not tested chp/tomA region Protein 9e-29 43