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Name : xerD (Lxx05670) Accession : YP_061637.1 Strain : Leifsonia xyli CTCB07 Genome accession: NC_006087 Putative virulence/resistance : Unknown Product : site-specific tyrosine recombinase XerD Function : - COG functional category : L : Replication, recombination and repair COG ID : COG4974 EC number : - Position : 577677 - 578582 bp Length : 906 bp Strand : + Note : site-specific tyrosine recombinase which cuts and rejoins DNA molecules; binds cooperatively to specific DNA consensus sites; forms a heterotetrameric complex with XerC; XerCD exhibit similar sequences; essential to convert chromosome dimers to monomers d DNA sequence : ATGACAGTCCCGGCCGACGTCGATGCCTACCTCAGGCATGTGGCGATCGAGCGCGGGCTATCGGCCAACACCGTCGCGGC CTACCGCCGCGATCTCGCGGTGTACGCGGGGTGGCTGGCCGTGGAGCAGGTGACGCAGACGGCCGCGGTCACCCCCGCGA CGGTCTCTGCGTACCTCCAGCACCTCGCGACGCGCGGCGAATCGCCCCTCACCGCGTCCTCCCTCGCCCGGATGCTGTCG ACCGTCCGCAGCTTCCACCGTTTCCTCCTCGAGGAGGGCCGCGTGACGGTGGATGCCGCTCACGACATCCGCCCGCCCAA ACTTCCGAGCCGCCTGCCGAAGGCGATCGGCGTCGACCAGGTTGCCGCCCTGCTGGCGGCGACGGACGGCGACGACCTCG CCGACCTCCGCGACAAGGCCCTCCTGGAACTGATGTACGCGACGGGCGCCCGCGTGAGCGAAGCGGTCGGGCTCAACGTG GACGACGTGATCGACACCGATGTCGTCCGACTCACCGGCAAGGGCGCCAAACAGCGCATCGTCCCGCTCGGCAGCTACGC CAGGGCCGCCGTCTCCGCCTACCTCGTCCGCGCCCGCCCCACCCTCTCCACCCGTGGCCGGGCCACTCCCGCGCTCTTCC TCGGGATGCGCGGCGCCCGTCTCTCCCGCCAGAACGTCTGGCTCATCATCCGAGCCGCTGCCGACCGCGCCGATCTGACC GTCGAGGTGTCGCCGCACATCCTGCGGCACTCGTTCGCCACCCACCTCCTCGCCGGTGGCGCGGACGTACGGGTGGTGCA GGAACTGCTCGGCCACTCGTCGGTCGCGACGACGCAGCTCTACACGCTGGTGACGGCGGACACGCTGCGGGACGTGTACG TGTCGGCGCACCCGCGGGCGCGGTAG Protein sequence : MTVPADVDAYLRHVAIERGLSANTVAAYRRDLAVYAGWLAVEQVTQTAAVTPATVSAYLQHLATRGESPLTASSLARMLS TVRSFHRFLLEEGRVTVDAAHDIRPPKLPSRLPKAIGVDQVAALLAATDGDDLADLRDKALLELMYATGARVSEAVGLNV DDVIDTDVVRLTGKGAKQRIVPLGSYARAAVSAYLVRARPTLSTRGRATPALFLGMRGARLSRQNVWLIIRAAADRADLT VEVSPHILRHSFATHLLAGGADVRVVQELLGHSSVATTQLYTLVTADTLRDVYVSAHPRAR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00307 | YP_008207772.1 | Site-specific recombinase XerD | Not tested | AbaR25 | Protein | 3e-32 | 43 |
| BJAB0868_00311 | YP_008211637.1 | Site-specific recombinase XerD | Not tested | AbaR26 | Protein | 3e-32 | 43 |
