Gene Information

Name : aldA (Lxx22600)
Accession : YP_063032.1
Strain : Leifsonia xyli CTCB07
Genome accession: NC_006087
Putative virulence/resistance : Virulence
Product : aldehyde dehydrogenase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : -
Position : 2329051 - 2330580 bp
Length : 1530 bp
Strand : +
Note : identified by sequence similarity

DNA sequence :
ATGAGCACCCAGGCTCTCGCAATCGACGCTTCGCGCACGATCGTCGACGGCGGCGTCATCTACCACCGGCCCGGTGACAG
CGGTAGCATCGTGCCGCTGCGAACGCGATACGACAACTTCATCGGCGGCCAATGGCGCGCACCCTCGACCGGGCGCTACG
GCGAGGACATCGCTCCCGCCACCGGCCAGCCGTTCGCCGAGTACGCCCGGTCAGGGCCGGACGACGTCGACGCAGCGGTC
GCCGAGCGCGCCGCCGTGCTGAACGCCATCGCCGATCGACTCGAACAGAATCTCGAGAGCATCGCCGTGATGGAATCGCG
GGAGAACGGCAAACCGGTGCGTGAAACGCTCCACGCGGACATTCCCCTGGCGCTCGACCACTTCCGATACTTCGCCTCAG
CGATACGCGCGCAGGAGGGAACGATCGCACCCCTCAGCCGGGATCTCGTATCATACCACTTCTTCGAGCCGATCGGTGTG
GTAGCGCAGATCATTCCGTGGAACTTTCCTCTCTTGATGGCCGCGTGGAAGCTCGCCCCCGCGATCGCCGCCGGCAACAC
CGTGGTCCTCAAGCCCGCGAGCGCGACGCCTGTCTCCGTGCTCTACGTCCTGCAGCTGATCGAGGACCTGCTGCCGGCCG
GCGTGGTCAACGTGGTCAACGGTGCGGGGTCGACGCTCGGCCAGGCCTTGGTGGAGCACCCGGGAGTGGCGAAGGTGGCG
TTCACCGGTTCAACGGAGACGGGCCGTCAGATCATGCAGTACGCCGTCAAGAACATCATCCCCTCGACGATGGAACTCGG
CGGTAAGTCGCCGAACATCTACTTCGATGACGTCAGTCGCGAACACGACGCCTTCTACCGCAAAGCCCTCGAGGGAATGT
CGCTGTTCGCGTTCAACAAGGGCGAGGTCTGTTCCTGCCCGTCACGTGCGTTCCTGCAGAGGGGCCTCATCCGGGACGGA
TTCCTGGATGCCGCGGTCGAGCGAATCTCCCGGATCCGCGTCGGTGACCCTCTCGACACACGAACGGAGATGGGTCCGCA
GAACAGCGCCGAGCAGGTGGACAAGATCGCCGGATATCTCGCACTCGGCCCCATGGAGGGATGCGAGGTGCTCGCCGGCG
GCGGACTCGCCGACCTCGGCGGGGACCTCTCGGGGGGCTATTTCGTCGAGCCCACGGTGTTTCGGGGGCGCAACGAGATG
AGGGTCTTCCAGGAGGAGATCTTCGGCCCTGTCCTCGCTGTGGCCGCTTTCGACGAGTACGACGAAGCGATTCATCTCGC
GAACGCGACCATTTACGGGCTCGGATCCGGTGTCTGGAGTCGTGACGCCGACCTCACCTTCGCCGCGAGCCGCGACATCC
ACGCGGGACGGGTATGGGTGAACACGTACCACCAGTATCCGGCTGGGGCCGCCTTCGGTGGGTACAAGCAGTCGGGCTAC
AGCCGCGAAACCGACCAGCAAACCCTGCGCAACTACCAGCAGGTGAAGAACGTTCTCGTCAATCACCAGCCGCTCGGCCT
CTTCGTCTGA

Protein sequence :
MSTQALAIDASRTIVDGGVIYHRPGDSGSIVPLRTRYDNFIGGQWRAPSTGRYGEDIAPATGQPFAEYARSGPDDVDAAV
AERAAVLNAIADRLEQNLESIAVMESRENGKPVRETLHADIPLALDHFRYFASAIRAQEGTIAPLSRDLVSYHFFEPIGV
VAQIIPWNFPLLMAAWKLAPAIAAGNTVVLKPASATPVSVLYVLQLIEDLLPAGVVNVVNGAGSTLGQALVEHPGVAKVA
FTGSTETGRQIMQYAVKNIIPSTMELGGKSPNIYFDDVSREHDAFYRKALEGMSLFAFNKGEVCSCPSRAFLQRGLIRDG
FLDAAVERISRIRVGDPLDTRTEMGPQNSAEQVDKIAGYLALGPMEGCEVLAGGGLADLGGDLSGGYFVEPTVFRGRNEM
RVFQEEIFGPVLAVAAFDEYDEAIHLANATIYGLGSGVWSRDADLTFAASRDIHAGRVWVNTYHQYPAGAAFGGYKQSGY
SRETDQQTLRNYQQVKNVLVNHQPLGLFV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 3e-109 58
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 2e-115 53
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 2e-115 53
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 2e-115 53
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 6e-115 53

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
aldA YP_063032.1 aldehyde dehydrogenase VFG0082 Protein 1e-109 58