Gene Information

Name : Lxx17230 (Lxx17230)
Accession : YP_062588.1
Strain : Leifsonia xyli CTCB07
Genome accession: NC_006087
Putative virulence/resistance : Virulence
Product : iron-vibriobactin/enterobactin uptake porter
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1120
EC number : -
Position : 1785292 - 1786095 bp
Length : 804 bp
Strand : -
Note : identified by sequence similarity

DNA sequence :
ATGACCGGCACCGTCATCCGCACGCTCGCCGCGAGCGGCCTGACCCTCGCCTACGAGGGCCGGGCCGTCGTCCGCGGCCT
CGACCTGGAGATCCCGCCCGGCCGCCTCACCGCGATCGTCGGCCCCAATGCCTGCGGTAAGTCGACGCTCCTGCGCGGGC
TCGCCCGCCTGCTCGCGCCGGTCTCGGGCGCGGTGCTGCTCGACGGCGCCGACATCTACGCCCTCCCCACCAAACAAGTC
GCGACCCGGCTGGGGCTCCTCCCGCAGACTCCGGCCGCTCCCGACGGGATCACCGTCGCCGACCTCGTCTCCCGCGGACG
CTACCCGCACCAGGGCTGGTTCCGCTGCTGGACGGCCGCGGACGACGCCGCGGTCGCCGAAGCCATGACCGCGACCGGTG
TCGCCGCCCTGGCCGAGCGTGCCATCGACGAGCTCTCCGGCGGCCAGCGCCAGCGCGTCTGGATCGCGATGGCCCTCGCC
CAGCAGACCGACATCCTCCTGCTCGACGAGCCGACCACTTTTCTCGACATCGCCCACCAACTCGAGGTGCTGGACCTGCT
TCTCGACCTGAACGCCGCCAAGGGCACAACCATCGCGATGGTGCTGCACGACCTCAACCTGGCGGCGAGGTACGCGGACC
ACCTGGTCGCGCTACGGGCGGGCGGGATCGTGGCGGCCGGCGAGCCGGCCAGCGTCGTGACGGCGGGACTCGTCCGTGAG
GTTTTCGGGGTGGAGTCGGTCATCGTGGACGACCCGGTGACGGGGACGCCGCTGGTGGTGCCGCGGGGACGGCATCACCG
CTGA

Protein sequence :
MTGTVIRTLAASGLTLAYEGRAVVRGLDLEIPPGRLTAIVGPNACGKSTLLRGLARLLAPVSGAVLLDGADIYALPTKQV
ATRLGLLPQTPAAPDGITVADLVSRGRYPHQGWFRCWTAADDAAVAEAMTATGVAALAERAIDELSGGQRQRVWIAMALA
QQTDILLLDEPTTFLDIAHQLEVLDLLLDLNAAKGTTIAMVLHDLNLAARYADHLVALRAGGIVAAGEPASVVTAGLVRE
VFGVESVIVDDPVTGTPLVVPRGRHHR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 1e-58 52
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 4e-47 48
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 2e-56 48
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 2e-56 48
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 7e-54 48
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 7e-54 48
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 7e-54 48
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 7e-54 48
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 6e-47 46
CDCE8392_1767 YP_005134301.1 iron complex transport system ATP-binding protein Virulence Not named Protein 3e-29 44
ciuD YP_005681255.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 1e-45 43
ciuD YP_005683346.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 1e-45 43
ciuD YP_003783391.1 iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 1e-45 43
ciuD YP_005685432.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 1e-45 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Lxx17230 YP_062588.1 iron-vibriobactin/enterobactin uptake porter BAC0164 Protein 3e-47 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Lxx17230 YP_062588.1 iron-vibriobactin/enterobactin uptake porter VFG0925 Protein 1e-60 58
Lxx17230 YP_062588.1 iron-vibriobactin/enterobactin uptake porter VFG1042 Protein 2e-47 48