Gene Information

Name : Lxx17210 (Lxx17210)
Accession : YP_062586.1
Strain : Leifsonia xyli CTCB07
Genome accession: NC_006087
Putative virulence/resistance : Unknown
Product : transposase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 1783163 - 1783846 bp
Length : 684 bp
Strand : +
Note : identified by sequence similarity

DNA sequence :
GTGGCCGATCCCGACGGGGGAGAGCGCTCCCGGCGCGCCGCGAGAGCGGCGTCACTATCAAGCAGCTCGCGACCGACTTC
GGTATCAGCGAAGCAACCTTGCAGAGTCAAGTTCATCTGCCGTGTCCTCCGACCGGTAGTGCAGGGCTTCCTCACCTCTC
TCGGCTATCGCGCCGCTATTGGGCGGGCGCCATCTGCCCGGCAACTGAGAGATTACCTCCTCGTTCCGGAGGTCACTCGG
TTGCACGCGGAGAACTACGGCTTTTACGGTCGCCGCAAGATGCATGCGTTGATGCGCCGGCAAGGGTGGGTCATCGGCCG
CGATCAGACCGAGCGGCTCATGCGCCTCGCGGGAGTGCGCGGGGTGCGCAAGTCGAAGCGGGTGCTCACCACACACTCCG
ATAAGACCACCGTGCTACCGGCCGATCTGGTCAACCGCCGCTTCACGGCGCCCGCGCCGCGGCGGCTCTGGGTCTGTGAC
GTCACCTACGTCGCGACGTGGTCCGGCTTCGCTTACGTCGCGTTCGTCACGGATGTCTACTCGCGCCGGATCGTCGGTTG
GAACGTCGCCGCCACGCTACGGTCAGAGATCCTGCCGATGCAGGCGCTCGACATGGCCGCGTGGGGTGCCGGTGGCGATC
TCACCAGTCTAATCCATCACGCGGACCACGGGTCGAACAGCTAG

Protein sequence :
MADPDGGERSRRAARAASLSSSSRPTSVSAKQPCRVKFICRVLRPVVQGFLTSLGYRAAIGRAPSARQLRDYLLVPEVTR
LHAENYGFYGRRKMHALMRRQGWVIGRDQTERLMRLAGVRGVRKSKRVLTTHSDKTTVLPADLVNRRFTAPAPRRLWVCD
VTYVATWSGFAYVAFVTDVYSRRIVGWNVAATLRSEILPMQALDMAAWGAGGDLTSLIHHADHGSNS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CDCE8392_1774 YP_005134308.1 transposase-like protein Not tested Not named Protein 9e-36 54
CDC7B_2035 YP_005163476.1 transposase-like protein Not tested Not named Protein 3e-42 53
CDCE8392_1958 YP_005134489.1 transposase-like protein Not tested Not named Protein 6e-44 52
CDCE8392_1985 YP_005134516.1 transposase-like protein Not tested Not named Protein 1e-33 50
CDHC03_0163 YP_005137212.1 transposase-like protein Not tested Not named Protein 2e-33 48
c5167 NP_757015.1 transposase IS629 Not tested PAI II CFT073 Protein 1e-20 42