|
Name : rplS (Lxx14820) Accession : YP_062396.1 Strain : Leifsonia xyli CTCB07 Genome accession: NC_006087 Putative virulence/resistance : Unknown Product : 50S ribosomal protein L19 Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0335 EC number : - Position : 1542063 - 1542410 bp Length : 348 bp Strand : - Note : this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site DNA sequence : ATGCACATCCTCGACCAGGTCGACGCCGCTTCCCTCAAACAGGACATCCCGGCCTTCCGCGCCGGTGACACCGTCAAGGT TCACGTCAACATCATCGAGGGCAGCCGCTCTCGTGTCCAGGTCTTCCAGGGTGTCGTGATCGCCCGCTCCGGCGAAGGCG TCCGCGAGACCTTCACTGTCCGCAAGATCAGCTTCCAGGTCGGCGTCGAGCGCATGTTCCCGGTCCATTCGCCGGTCATC GACAAGATCGAGGTCGTCACCCGCGGCGATGTCCGCCGTGCGAAGCTCTACTATCTCCGCGAACTCCGCGGCAAGAAGGC GAAGATCAAGGAGAAGCGCGACAACTGA Protein sequence : MHILDQVDAASLKQDIPAFRAGDTVKVHVNIIEGSRSRVQVFQGVVIARSGEGVRETFTVRKISFQVGVERMFPVHSPVI DKIEVVTRGDVRRAKLYYLRELRGKKAKIKEKRDN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| rplS | CAA68924.1 | ribosomal protein L19 | Not tested | Internalin | Protein | 3e-33 | 63 |
| rplS | AAS66827.1 | 50S ribosomal subunit protein | Not tested | SSR-1 | Protein | 6e-27 | 56 |
