Gene Information

Name : Lxx14530 (Lxx14530)
Accession : YP_062372.1
Strain : Leifsonia xyli CTCB07
Genome accession: NC_006087
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1508935 - 1509666 bp
Length : 732 bp
Strand : -
Note : identified by sequence similarity

DNA sequence : 
GTGGCCCGTGTCGAGTCCGCCACCAAGACCTACGGCACCGGTGCCGGCCGCGTGAACGCCCTCGACGGGGTGACGCTCGG
CATCCCGGCTGGCCAGTTCACCGCCGTCATGGGCCCGAGCGGTTCCGGCAAGTCCACGCTCATGCACGTCATGGCGGGGC
TGGACAGCGTGACGAGCGGCCGGGTGTTCCTCGGCGACACCGAGATCACCGGGCTCGGGGACACCGAGCTGACGGTGCTG
CGCCGCCGCCGGGTCGGCTTCGTCTTCCAGTCCTTCAACCTCGTTCCGACCCTGGATGTGCGGGCCAATATCCTGCTCCC
ATTCGAGATCGACGGCCGCAAGCCGACGATCGTGCAGCGGGAGTGGATCGATGGGCTCATCGAAACGCTCGGACTCACCG
ACCGCCTCACCCACCGGCCGCACGAGATCTCCGGCGGACAGCAGCAGCGCGTCGCGATCGTGCGCGCCCTGGCGACCCGC
CCCGACCTGGTCTTCGCTGACGAGCCGACCGGCAACCTCGACTCCCGCACCGGACGCGAGGTGCTCGGCGTGCTCCGGGA
GGCGGTCCGGACCTATGGCCAGAGCATCGCGATGGTGACGCACGACCCCGTCGCCGCGAGCTATGCAGACCATCTCGTGT
TCCTCGCCGACGGCCGCATTGTCGCGGAGCGCGAGCCGTCCAGCGCCGAGGACATCTCGGCCTTCATGCTCGGGATGGAG
GCGTTCGCGTGA

Protein sequence : 
MARVESATKTYGTGAGRVNALDGVTLGIPAGQFTAVMGPSGSGKSTLMHVMAGLDSVTSGRVFLGDTEITGLGDTELTVL
RRRRVGFVFQSFNLVPTLDVRANILLPFEIDGRKPTIVQREWIDGLIETLGLTDRLTHRPHEISGGQQQRVAIVRALATR
PDLVFADEPTGNLDSRTGREVLGVLREAVRTYGQSIAMVTHDPVAASYADHLVFLADGRIVAEREPSSAEDISAFMLGME
AFA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 8e-33 43
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-34 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-34 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 3e-34 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Lxx14530 YP_062372.1 ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 7e-50 47
Lxx14530 YP_062372.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 1e-48 47
Lxx14530 YP_062372.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 3e-34 44