Gene Information

Name : pyk (Lxx11340)
Accession : YP_062088.1
Strain : Leifsonia xyli CTCB07
Genome accession: NC_006087
Putative virulence/resistance : Virulence
Product : pyruvate kinase II
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0469
EC number : -
Position : 1163640 - 1165106 bp
Length : 1467 bp
Strand : +
Note : identified by sequence similarity

DNA sequence :
ATGAGAAGGGCGAAAATCGTCGCGACCCTCGGGCCGGCGACCTCCAGCTATGACAACATCCGCGCCATCGTCGACGCGGG
CGTCGACGTGGCCCGGATGAACCTCAGCCACGGCAGCTACGAGGTGCATGAGGGGGTCTACGCCAACGTTCGGAAGGCTG
CGGAGGACGCCGGCAAACCGGTCGCGGTCCTGGTCGACCTCCAAGGCCCGAAGATTCGCCTCGGCAAGTTCGAGGCCGGT
CCCTACGAACTCGCCGAGGGCGATATCTTCACGATCACCACCGAGGAAATCATCGGCACCAAGGAGATCTCCTCCACCAC
GTTCAAGGGGTTGCCCCAGGACGTGAAGCCGGGTGACTTCCTGCTGATCGACGACGGAAAGGTGCGCGTGCGCGTGCTGG
AGACCGATGGCACGGCCGTAACCACTGAGGTGGTCGTGGCCGGTCCCGTCTCCAACAACAAGGGCATCAACCTTCCCGGT
GTCGCGGTGAACGTGCCCGCGCTGTCCGAGAAGGACGAGGCCGACCTCCGCTGGGGCCTGAATCTGGGCGCCGATCTCAT
CGCCCTCTCGTTCGTGCGCAACGCGGGGGACATCGAGCGCGTACACGAGATCATGGCCGAGGAGGGCCGTAAGGTCCCCG
TCATCGCCAAGATCGAGAAGCCGCAAGCCGTTGACGCTCTGGAGGGCATCATCGAGGCGTTCGACGGCATCATGGTCGCG
CGTGGCGACCTGGGCGTCGAGTTGCCGCTGGAGGCGGTGCCGATCGTGCAGAAGCGCGCGGTCGAACTCGCCCGCCGTGC
GGCCAAGCCGGTCATCGTCGCGACGCAGATGCTGGAGTCGATGATCTCGAGCCCGGTACCGACCCGCGCCGAGACATCCG
ACGTCGCTAACGCCGTCCTCGATGGCTCGGATGCGGTCATGCTCTCGGGGGAGACCAGTGTCGGCGAGTACCCGAAGATC
ACCGTTCAGACGATGGCGAAGATCGTGAAATCGACCGAAGAGCACGGTCTCGACCGGATCGCCCCGCTCGGCACCAAGCC
GCGCACGCAGTCCGGCGCGATCACCCTGGCCGCGACCGAGGTGGCGGACTTCGTCGAGGCCAAGTACCTCTGCGTGTTCA
CCGAGTCCGGCGAGTCGGCCCGTCGCATGGCGCGTCTGCGCAGCAAGATCCGGATCCTCGCCTTCACACCGGAGGAGTCG
ACCCGTCGCAAGATGGCGCTCTATTGGGGCGTGGAGTCCTTCGTGGTCGACCGGGTCACCCACACCGACCAGATGGTCGC
GCAGGTGGACGAGGCGCTGAAGTCCACGGGCCGAGCGGAGAACGGCGACAAGGTGGTCATCATTTCCGGGTCGCCTCCCG
GGATTCCTGGCACCACCAACGACATCCGCGTACACCGGGTCGGCGACGTCCTGTGTAGCGAAACGCAGCGAAGGGCCTCG
CGCTTCGGGGACCGCTCCCGGCTGTGA

Protein sequence :
MRRAKIVATLGPATSSYDNIRAIVDAGVDVARMNLSHGSYEVHEGVYANVRKAAEDAGKPVAVLVDLQGPKIRLGKFEAG
PYELAEGDIFTITTEEIIGTKEISSTTFKGLPQDVKPGDFLLIDDGKVRVRVLETDGTAVTTEVVVAGPVSNNKGINLPG
VAVNVPALSEKDEADLRWGLNLGADLIALSFVRNAGDIERVHEIMAEEGRKVPVIAKIEKPQAVDALEGIIEAFDGIMVA
RGDLGVELPLEAVPIVQKRAVELARRAAKPVIVATQMLESMISSPVPTRAETSDVANAVLDGSDAVMLSGETSVGEYPKI
TVQTMAKIVKSTEEHGLDRIAPLGTKPRTQSGAITLAATEVADFVEAKYLCVFTESGESARRMARLRSKIRILAFTPEES
TRRKMALYWGVESFVVDRVTHTDQMVAQVDEALKSTGRAENGDKVVIISGSPPGIPGTTNDIRVHRVGDVLCSETQRRAS
RFGDRSRL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pykF YP_216386.1 pyruvate kinase Not tested SPI-2 Protein 6e-58 41
pykF NP_805051.1 pyruvate kinase Not tested SPI-2 Protein 6e-58 41
pykA NP_273151.1 pyruvate kinase Not tested IHT-A Protein 1e-55 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
pyk YP_062088.1 pyruvate kinase II VFG0479 Protein 2e-58 41