Gene Information

Name : PPA0965 (PPA0965)
Accession : YP_055676.1
Strain : Propionibacterium acnes KPA171202
Genome accession: NC_006085
Putative virulence/resistance : Unknown
Product : pyridoxal biosynthesis lyase PdxS
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0214
EC number : -
Position : 1049873 - 1050787 bp
Length : 915 bp
Strand : +
Note : with PdxT forms pyridoxal 5'-phosphate from glutamine, either ribose 5-phosphate or ribulose 5-phosphate, and either glyceraldehyde 3-phosphate or dihydroxyacetone phosphate

DNA sequence :
ATGGGGTCCATGAGTGAACACATCCCTGCAACGAATAGCACTGGAACGACACGAGTCAAGCGTGGACTGGCCGACATGCT
CAAGGGTGGCGTCATCATGGACGTCGTCACCCCCGAGCAGGCGAAGATCGCCGAGGATGCCGGAGCTTGTGCCGTTATGG
CCCTGGAAAGAGTCCCTGCCGATATCCGAGCTCAGGGTGGCGTGGCAAGGATGAGCGACCCCGACCTTATCGAGGGCATC
ATCGAGGCTGTCTCCATCCCTGTGATGGCCAAGGCCAGGATCGGCCACTTCGTCGAGGCTCAAGTGCTCGAGTCCCTCAG
GGTGGACTTTATCGATGAGTCGGAAGTGCTTAGCCCGGCTGACTACGCCAATCACATCGATAAGTGGGCCTTTGGCGTCC
CCTTCGTGTGTGGGGCGACGAACCTGGGTGAGGCTCTGCGCCGCATCACCGAGGGCGCTGCGATGATCCGATCTAAGGGA
GAGGCGGGCACCGGAGATGTTTCCGAGGCCGTCCGTCACCTGCGTACCATCCGTGCTGAAATGGCGCGGTTGAGCAGCAT
GTCTCCCGACGAGCTCTATGTTGCGGCCAAAGAGCTGCAGGCTCCTTACGACCTCGTTGCCGAGGTAGCTCGCACGGGAG
AGCTGCCGGTGGTGCTTTTTGTCGCTGGGGGAGTGGCCACTCCCGCCGATGCCGCCCTGGTTATGCAGATGGGGGCCCAG
GGCGTCTTCGTGGGTTCGGGCATCTTCAAGTCCGGTAACCCGGCCGCTCGGGCCGCGGCTATCGTCAAGGCAACGACCGC
CTACGATGATCCCGACACAATTGCCGAGGTTTCTCGTGGTTTGGGCGAGGCCATGGTCGGCATCAATGTCGCTGATGTAC
CAGCCCCGCACCGTCTGGCTGAGCGAGGTTGGTGA

Protein sequence :
MGSMSEHIPATNSTGTTRVKRGLADMLKGGVIMDVVTPEQAKIAEDAGACAVMALERVPADIRAQGGVARMSDPDLIEGI
IEAVSIPVMAKARIGHFVEAQVLESLRVDFIDESEVLSPADYANHIDKWAFGVPFVCGATNLGEALRRITEGAAMIRSKG
EAGTGDVSEAVRHLRTIRAEMARLSSMSPDELYVAAKELQAPYDLVAEVARTGELPVVLFVAGGVATPADAALVMQMGAQ
GVFVGSGIFKSGNPAARAAAIVKATTAYDDPDTIAEVSRGLGEAMVGINVADVPAPHRLAERGW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
DIP0227 NP_938620.1 pyridoxal biosynthesis lyase PdxS Not tested Not named Protein 1e-117 91
pdxS YP_005137204.1 pyridoxine biosynthesis protein Not tested Not named Protein 1e-117 91
pdxS YP_005141805.1 pyridoxine biosynthesis protein Not tested Not named Protein 2e-117 91