Gene Information

Name : rplS (Mfl539)
Accession : YP_053781.1
Strain : Mesoplasma florum L1
Genome accession: NC_006055
Putative virulence/resistance : Unknown
Product : 50S ribosomal protein L19
Function : -
COG functional category : J : Translation, ribosomal structure and biogenesis
COG ID : COG0335
EC number : -
Position : 635387 - 635773 bp
Length : 387 bp
Strand : -
Note : this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site

DNA sequence :
ATGGCATCAAAAGCAACTAAAACAACACAATCAAAATACGCTATTATTAACAACCAATTACGTAACGACTTACCAGATTT
TACATCAGGGGATACTATTAAAGTTGACGTTAAAATTAAAGAGGGAGAAAAATTCCGTATTCAAACATTTGAAGGATTAG
TAATCAAAACTCAAGGTTCAGGTATTACTTATTCTGTTGTTGTTAGAAAATTATCAAACGGTGTATTCGTAGAAAGAACT
TTCCCACTACATTCACCAATTATTGATAAAGTTACTATCGTTAAACGTGGACGTGTACGTAGAGCTAGAATTTACTACAT
CAGAAAATTATCAGGTAAAGCTGCAAGAATTAAAGAAATCTTACCAACAAAAGCTGATAAAAAATAG

Protein sequence :
MASKATKTTQSKYAIINNQLRNDLPDFTSGDTIKVDVKIKEGEKFRIQTFEGLVIKTQGSGITYSVVVRKLSNGVFVERT
FPLHSPIIDKVTIVKRGRVRRARIYYIRKLSGKAARIKEILPTKADKK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rplS CAA68924.1 ribosomal protein L19 Not tested Internalin Protein 3e-26 57
rplS AAS66827.1 50S ribosomal subunit protein Not tested SSR-1 Protein 7e-21 49