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Name : xcpR (ACIAD3024) Accession : YP_047550.1 Strain : Acinetobacter sp. ADP1 Genome accession: NC_005966 Putative virulence/resistance : Virulence Product : general secretion pathway protein E Function : - COG functional category : N : Cell motility COG ID : COG2804 EC number : - Position : 2952534 - 2954024 bp Length : 1491 bp Strand : - Note : Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; Product type t : transporter DNA sequence : GTGATGCAAATACTTAAACAAATACAAATTCCATATAGTTTTGCGAAACGCCATGGTGTGTTGTTTCGTTACGAGGGCGA TCAGGTTTTTATTGTACGCAAAAAAAATACAGCATGGATTGCATTGCAGGAAGCACATCGTTTGTTGGGTAAGTCTGCAC ATGATCAATTATGTGATGAGCAAGCATTTAATGCATTATTAAGTTCTAGCTATGCAGGAGATCGTGGTGAATCACAACAA GTCGCTGCCGGACTTGAAGATCATCCTGACTTACTTAGTCTAGCCGATCAGGTTCCTGAAGCAGAAGATTTGATGGATCA GGAAGATGATGCACCGATTGTTAGACTAATCAATGCCTTACTTTCTGAGGCGATTCGTGTCAGTGCATCAGATATTCATA TCGAAGCGTTTGAAAAAAAATTATCAGTAAGACTACGTGTTGATGGGCAGCTTCGTGAAATTGTTCAGCCGCGCCGTGAG CTTGCACCGTTGCTGGTGTCGCGCATCAAGGTGATGGCCAAGCTAGATATTGCAGAAAAACGTATTCCGCAAGATGGTCG TATTTCATTGCGTCTGGCTGGGCGTGAAGTCGATGTACGTGTTTCCACATTGCCTTCGTCACATGGTGAGCGCGTGGTGA TGCGTTTGTTGGATAAACAAGCGGGACGCTTGAATATGACTCATTTAGGGTTAATGGCGGAAGACTATGAACGTTTAAAA TATCTGGTACATCGTCCACATGGAATTATTCTGGTGACGGGGCCTACAGGTTCGGGTAAAACGACAACGCTCTATGCAGC CTTGTCAGACCTTAACGATCAGACCCGTAATATTTTGACGGCAGAAGATCCGATTGAATATCAGCTCGAAGGGATTGGGC AGACACAGGTCAATACCAAAGTTGATATGACCTTTGCTCGTGCACTGAAAGCCATGTTACGTCAAGATCCAGATGTGGTC ATGGTGGGAGAGATTCGTGATCTTGAAACCGCAGAAATTGCCGTGCAAGCCTCACTTACGGGTCACTTGGTTCTATCTAC CTTACATACCAATACAGCCATTGGCGCCGTGACACGCTTAAAAGATATGGGGATCGAACCATTTCTATTATCAAGTTCTC TCATTGGTGTGATTGCACAACGGTTGGTGCGTACTTTGTGCCCGCATTGCGTGAGCTGGCGTGAAGCAGATGATTTTGAA CAGCAGTTATTTCAACATCTTTCTAATGAGCCTCATTTAAAACTACCCGAGCCACAAGGTTGTGAACATTGTTCTTATCT GGGATTTAGTGGTCGAAGTGCAATCTATGAAATTGTTCCAATTGATGAACATATTCGCAGGATGATACATGGCAATTCGG CTGAGTACGAGCTTGAGGCGTATGCCCGTCGTCATGCAGGATCAATTCGTGAAGATGGTTTGAAAAAAGTGCTGGCAGGG AAGACTACACTTGAAGAAGTATTACGTGTAACCAACCAATCAGAAGAATAG Protein sequence : MMQILKQIQIPYSFAKRHGVLFRYEGDQVFIVRKKNTAWIALQEAHRLLGKSAHDQLCDEQAFNALLSSSYAGDRGESQQ VAAGLEDHPDLLSLADQVPEAEDLMDQEDDAPIVRLINALLSEAIRVSASDIHIEAFEKKLSVRLRVDGQLREIVQPRRE LAPLLVSRIKVMAKLDIAEKRIPQDGRISLRLAGREVDVRVSTLPSSHGERVVMRLLDKQAGRLNMTHLGLMAEDYERLK YLVHRPHGIILVTGPTGSGKTTTLYAALSDLNDQTRNILTAEDPIEYQLEGIGQTQVNTKVDMTFARALKAMLRQDPDVV MVGEIRDLETAEIAVQASLTGHLVLSTLHTNTAIGAVTRLKDMGIEPFLLSSSLIGVIAQRLVRTLCPHCVSWREADDFE QQLFQHLSNEPHLKLPEPQGCEHCSYLGFSGRSAIYEIVPIDEHIRRMIHGNSAEYELEAYARRHAGSIREDGLKKVLAG KTTLEEVLRVTNQSEE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 2e-132 | 58 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 1e-132 | 58 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| xcpR | YP_047550.1 | general secretion pathway protein E | VFG0182 | Protein | 8e-140 | 64 |
| xcpR | YP_047550.1 | general secretion pathway protein E | VFG1876 | Protein | 5e-131 | 57 |
| xcpR | YP_047550.1 | general secretion pathway protein E | VFG2048 | Protein | 5e-132 | 57 |
| xcpR | YP_047550.1 | general secretion pathway protein E | VFG0233 | Protein | 6e-84 | 49 |
| xcpR | YP_047550.1 | general secretion pathway protein E | VFG2426 | Protein | 1e-72 | 46 |
| xcpR | YP_047550.1 | general secretion pathway protein E | VFG1880 | Protein | 1e-82 | 43 |
| xcpR | YP_047550.1 | general secretion pathway protein E | VFG0112 | Protein | 2e-82 | 42 |
