|
Name : lysS (BT9727_0072) Accession : YP_034430.1 Strain : Bacillus thuringiensis 97-27 Genome accession: NC_005957 Putative virulence/resistance : Virulence Product : lysyl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG1190 EC number : 6.1.1.6 Position : 80566 - 82065 bp Length : 1500 bp Strand : + Note : class II; LysRS2; catalyzes a two-step reaction, first charging a lysine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; in Methanosarcina barkeri, LysRS2 charges both tRNA DNA sequence : ATGGATAACATGAACCACGAAGAATTAAACGACCAATTGCTTGTTCGTCGTGAAAAGCTACATAACTTACGTGAGCAAGG AATCGATCCTTTCGGTAAACGATTTGAACGTACAAATGCAACAAATGACTTATTAAGCCTATATGGAGAGTTCTCTAAAG AAGAATTAGAAGAGAAAGAAATCTCTGTTTCTATCGCTGGTCGTATTATGACAAAGCGTGGTAAAGGAAAAGCTGGATTT GCACATATTCAAGATTTACATGGACAAGTTCAAATTTATGTTCGTAAAGATGCTGTTGGAGATGAAGAATACGAATTATT TAAAACAGCAGATTTAGGTGACTTAGTAGGTATTGAAGGTAAAGTTTTTAAAACGAACGTTGGAGAACTTTCAGTGAAAG CAACAGGCTTTACACTATTAACGAAATCTCTTCGTCCATTACCGGATAAATATCATGGGTTAAAAGATGTTGAACAACGC TACCGTCAACGTTACTTAGACTTAATTACAAGTATGGAAAGTCGTGAAACATTCGTCACTCGCAGTAAGATCATTCGCGA AATGAGAAGATACTTAGATGACAACGGTTATCTTGAAGTGGAAACACCTATGATGCATGCAATTGCAGGTGGAGCTTCTG CTCGCCCTTTCATCACGCATCATAATGCGTTAGATATGGAATTATATATGCGTATCGCAATTGAACTTCATTTAAAACGC CTTATTGTGGGTGGATTAGAAAAAGTTTATGAAATCGGCCGTGTATTCCGTAATGAGGGTGTATCAACTCGTCATAATCC TGAATTTACGATGATTGAATTATATGAAGCGTATGCTGATTATAAAGATATTATGAAACTAACAGAAAATATGGTTGCTC ATATCGCGAAGCAAGTACTAGGTACAACAACAATCCAATATGGTGATTATGAAATTAATCTAGAACCAGAATGGACACGC CTTCATATGGTAGATGCAATTAAAGAACATTCTGGAGCAGATTTCTGGAATCCGATGAGTGTAGAAGAAGCGCGTGAACT TGCAAAAGAACATAATGTAGAAATTAAGGATACAATGGAAGTTGGTCATATTATTAATGAATTCTTCGAGCAAAAAGTAG AAGATAAATTAATCCAACCAACATTTATTTACGGTCATCCGGTAGAAATTTCGCCACTTGCGAAAAAGAATGATGAAGAT CCACGATTCACAGATCGTTTCGAATTGTTTATCGTTGCACGTGAACATGCAAATGCGTTCACTGAGCTAAATGATCCAAT CGATCAGAAAGAACGTTTTGAAGCGCAATTAAAAGAACGCGAACAAGGTAATGACGAAGCTCACATGATGGATGATGATT ATATCGAAGCTCTTGAGTATGGTATGCCTCCTACAGGTGGACTAGGAATTGGTATTGATCGCCTTGTTATGTTATTAACG AATGCACCATCTATTCGTGATGTATTATTATTCCCTGCTATGCGTCATAAACAAGACTAA Protein sequence : MDNMNHEELNDQLLVRREKLHNLREQGIDPFGKRFERTNATNDLLSLYGEFSKEELEEKEISVSIAGRIMTKRGKGKAGF AHIQDLHGQVQIYVRKDAVGDEEYELFKTADLGDLVGIEGKVFKTNVGELSVKATGFTLLTKSLRPLPDKYHGLKDVEQR YRQRYLDLITSMESRETFVTRSKIIREMRRYLDDNGYLEVETPMMHAIAGGASARPFITHHNALDMELYMRIAIELHLKR LIVGGLEKVYEIGRVFRNEGVSTRHNPEFTMIELYEAYADYKDIMKLTENMVAHIAKQVLGTTTIQYGDYEINLEPEWTR LHMVDAIKEHSGADFWNPMSVEEARELAKEHNVEIKDTMEVGHIINEFFEQKVEDKLIQPTFIYGHPVEISPLAKKNDED PRFTDRFELFIVAREHANAFTELNDPIDQKERFEAQLKEREQGNDEAHMMDDDYIEALEYGMPPTGGLGIGIDRLVMLLT NAPSIRDVLLFPAMRHKQD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 2e-121 | 51 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| lysS | YP_034430.1 | lysyl-tRNA synthetase | VFG1668 | Protein | 1e-121 | 51 |
