Gene Information

Name : llrF (BT9727_0482)
Accession : YP_034830.1
Strain : Bacillus thuringiensis 97-27
Genome accession: NC_005957
Putative virulence/resistance : Virulence
Product : response regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 567228 - 567899 bp
Length : 672 bp
Strand : +
Note : -

DNA sequence : 
ATGCGCTTACTCGTAGTAGAAGATAATGCTTCTTTATTAGAGTCTATCGTACAAATTTTGCGTGATGAATTTGAAGTAGA
TACAGCATTGAATGGAGAAGAGGGATTATTTCTAGCGTTACAAAATATATATGATGCAATTTTGCTTGATGTGATGATGC
CAGAAATGGATGGATTTGAAGTGATTCAAAAAATACGTGATGAAAAGATTGAAACACCTGTCTTATTTTTGACAGCGAGA
GATTCTTTAGAAGATCGCGTGAAAGGGTTGGATTTTGGCGGGGATGACTATATCGTTAAGCCGTTTCAGGCCCCAGAATT
AAAAGCAAGAATTCGTGCTTTATTAAGGCGAAGTGGTAGTTTAACAACGAAGCAGACTATTCGATATAAAGGGATTGAAC
TGTTCGGAAAAGATAAAGATGTTCAAGTAGATGGACAAAGTATGAAGCTAACATTAAAACAATATGAGCTTCTAGAGTAC
CTTGTTCAAAATAGCGGAAAGATTTTAATGAGGGAACAAATTTTTGATCGTGTTTGGGGATTTGATTCAGATACGACAGT
GGCAATTGTAGAAGTGTATGTACATCATTTACGTAAAAAATTAGAGCCATTCGGTTATCAGAAAGATATTCAAACCGTTC
GTGGTATTGGATATATATTAAAAGAACAATGA

Protein sequence : 
MRLLVVEDNASLLESIVQILRDEFEVDTALNGEEGLFLALQNIYDAILLDVMMPEMDGFEVIQKIRDEKIETPVLFLTAR
DSLEDRVKGLDFGGDDYIVKPFQAPELKARIRALLRRSGSLTTKQTIRYKGIELFGKDKDVQVDGQSMKLTLKQYELLEY
LVQNSGKILMREQIFDRVWGFDSDTTVAIVEVYVHHLRKKLEPFGYQKDIQTVRGIGYILKEQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 5e-35 42
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 1e-34 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
llrF YP_034830.1 response regulator BAC0125 Protein 5e-36 44
llrF YP_034830.1 response regulator AE015929.1.gene1106. Protein 9e-37 43
llrF YP_034830.1 response regulator BAC0638 Protein 1e-33 43
llrF YP_034830.1 response regulator NC_003923.1003417.p0 Protein 2e-41 42
llrF YP_034830.1 response regulator NC_013450.8614146.p0 Protein 2e-41 42
llrF YP_034830.1 response regulator NC_002951.3238224.p0 Protein 2e-41 42
llrF YP_034830.1 response regulator NC_007793.3914065.p0 Protein 2e-41 42
llrF YP_034830.1 response regulator NC_002758.1121390.p0 Protein 2e-41 42
llrF YP_034830.1 response regulator NC_010079.5776364.p0 Protein 2e-41 42
llrF YP_034830.1 response regulator NC_002952.2859858.p0 Protein 2e-41 42
llrF YP_034830.1 response regulator NC_007622.3794948.p0 Protein 2e-41 42
llrF YP_034830.1 response regulator BAC0308 Protein 1e-32 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
llrF YP_034830.1 response regulator VFG1386 Protein 6e-42 43
llrF YP_034830.1 response regulator VFG0596 Protein 2e-35 42
llrF YP_034830.1 response regulator VFG1390 Protein 6e-39 42
llrF YP_034830.1 response regulator VFG1389 Protein 6e-37 42