Gene Information

Name : ybcD (BT9727_2937)
Accession : YP_037260.1
Strain : Bacillus thuringiensis 97-27
Genome accession: NC_005957
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : S : Function unknown
COG ID : COG3002
EC number : -
Position : 3012564 - 3015188 bp
Length : 2625 bp
Strand : -
Note : Structural feature(s) predicted by Psort:Transmembrane: 3014904 - 3014888

DNA sequence :
ATGAGCATACCGTCAATATTAAGGAAAGAGACTTTAAAAAAGAAAGATAAAAATATTGATCTACAAGAAAATAATATAAA
TGATTTAGTTGTATCGGCTAGCCGAGTGATTGCGCCACTTTGGCCTATCTCTACATTTGCAGCTCATCACCCTTGGATGG
GGCTGGAAAAGCAATCATTTGAACAAGTTGCAAATTGGTTAAAAGAAGCTCGTAATGTGGATATTTATCCTAGTGCTTCC
ATGATTCATTCGGCAAAGGCGAAAGGTGAGATTGAGGAATCATTTTTACAAATTGCCTTGTCTCGTTGGCTTGATTCACA
ATCTTTTCATATGCCGCGAGAGACAGCGGAGCGTTTTTGTCAAGAAGCTTTAAAGTTAGAAAGGTTACCTTCTAGTCTAT
TATCATCGCCAGAATTAAATAAATTGGCAGAAGAAATAAATTATGTAAATACAGGGAGTATGAAAGACTCTTCTATGCAA
CCAATAAGCTCGCTTATAGAGAATCAAAATGGTGACAACCTATCGGATATTCTTAATTATCATATTATTAAATGGTGTAA
ATTATATCTTGATGACGCCGGGGCAAGTTGGGCGATGCCAAATCGAGAGAAAGGTTTTTATCGTGCGTGGCAACACCTTA
TTACATTTGATCCATCGCTCAGTAAAACTGAACGTAAAGTTTTAAAAGATTGGCCAGAAGATGCCCTTATAGCTTTAACA
AAAGCATTATCTGAATTAGGAATTTCTGAATCTAACATGCAAGCTTACCTTGAAGGGCACTTACTTTCTTTGCCTGGATG
GGCAGGAATGATACGATGGCGCTCGCAACAATCAATTGAGGAACAGGAACTTCTCATAGAATATTTAGCAGTTCGACTTT
CTATGGAGCTAGCCATTGTAAAACCGTATTTACCTTTAAAAAATCAAAAGGTTGAGAAAAAAGTTTCGATCGTCCCACTT
ATAGCTTCTTGGATCTATTGGGGGGATATTTCAATAGAGAAATGGTTACAAATGTCTGCAGCTGAACAAAGTGAATTATT
GGCATTCGCTTATCGCTTTGATGAAAATACTCGCAAGAAACTTTGGCTAGAAGCTTGGGAACAGACGCATGCAGAGCAAT
TAAGGGAGAAGATTGCTTCTAAGCAACGTGCAACTCATGATAAAAAGCGTGTAGTAGCTCAATTAGCATTTTGTATTGAT
GTACGTTCAGAACCGTTTCGTCGCCACCTTGAAAAATTAGGTCCGTTCGAAACGTTTGGAATAGCTGGTTTCTTTGGGTT
ACCAATTGCGACTACTGAACTAGGTAGTAATGACAGCCATCCTTCTTTGCCAGTTATATTAAAACCGAAACATCAAATAA
AAGAGCTAACAGATGAAAATGAATGTAAATCTTATGAACAACGTAAGATGGTAGGCAGTTCGGTACGTTATACATTTAAA
ACGATGAAACAGAACGTACTGACAAGTATGTTGCTACCTGAAGTAAGTGGTCCTTTACTTGGTTTACAAATGGTGACAAG
GAGTTTTGTGCCAAGAAGAGTAGGTGGCTTCATTCGTAACCTTCGTAAAAATATGTTGCAAAAGCCTGATACAACTTTCT
CGCTTAATCATGTTCATGATACAAACTGTGAGATACCAATCGGTTTTACGAAAGAAGAAAAAGTGAACTATGTGCGTCAA
GCTTTAAAAATGGTGGGATTAACAGAAGGTTTCGCTCCTTTAGTTGTAATGTGCGGCCACAGTAGTCAAAGTACGAACAA
TCCTTATGCTGCAGCGCTTGAGTGTGGTGCGTGTGGCGGAGCAGCGGGAGGATTTAATGCAAGAGTTTTCGCTACTTTAT
GTAATCTTCCAGAAGTGAGAGAGGCGTTGTCTGCTGAAGGTATTAAAATTCCCGATGACACCATTTTTGCAGCAGCTGAA
CATAAAACAACAGTGGATGAATTGGAATGGATTTACGTTCCAGAACTTTCGGAAACTGCGCAAGAAGCATTTGATTGTAT
TGAGGCCATTATGCCAAATGTGAGCCAACATGCAAATAGAGAGCGTTTAATGCAATTACCTCATTTTAAAACAAAAATAA
AAAATCCGAGTAAAGAGGCACACCGATTTGCAGAAGATTGGAGTGAAATACGTCCGGAATGGGGATTAGCACGTAATGCA
TCTTTTATTATCGGACAGCGTGAATTGACTCGGGATTGTGACTTAGAAGGTAGAGCTTTCCTTCATAATTATGATTGGAA
ACAGGATGAAAGTGGCGATATATTAGCTAACATCATAGCGGGACCGGGAACAGTAGCGCAGTGGATCAATCTACAATATT
ACGCTTCAACTGTAGCCCCTCATTATTATGGTAGTGGAAACAAAACAACACAAACCGTTACGGCAGGTCTTGGTGTTATG
CAAGGAAATGCAAGTGACTTGTTGCCAGGCTTACCTTGGCAATCCGTTATGCAGTCGGATCGTGAGACGTATCATTCACC
ACTCCGTTTATTAATTGTAATTCAAGCGCCTACTAAATATATAGAACGTTTGCTAAATAATAATTTCACATTTCGAGAAA
AAGTTCAAAATAAATGGGTTAGACTTGCCAGTGTTGATCCAGAGGGACGTTGGAAAAATTGGTAA

Protein sequence :
MSIPSILRKETLKKKDKNIDLQENNINDLVVSASRVIAPLWPISTFAAHHPWMGLEKQSFEQVANWLKEARNVDIYPSAS
MIHSAKAKGEIEESFLQIALSRWLDSQSFHMPRETAERFCQEALKLERLPSSLLSSPELNKLAEEINYVNTGSMKDSSMQ
PISSLIENQNGDNLSDILNYHIIKWCKLYLDDAGASWAMPNREKGFYRAWQHLITFDPSLSKTERKVLKDWPEDALIALT
KALSELGISESNMQAYLEGHLLSLPGWAGMIRWRSQQSIEEQELLIEYLAVRLSMELAIVKPYLPLKNQKVEKKVSIVPL
IASWIYWGDISIEKWLQMSAAEQSELLAFAYRFDENTRKKLWLEAWEQTHAEQLREKIASKQRATHDKKRVVAQLAFCID
VRSEPFRRHLEKLGPFETFGIAGFFGLPIATTELGSNDSHPSLPVILKPKHQIKELTDENECKSYEQRKMVGSSVRYTFK
TMKQNVLTSMLLPEVSGPLLGLQMVTRSFVPRRVGGFIRNLRKNMLQKPDTTFSLNHVHDTNCEIPIGFTKEEKVNYVRQ
ALKMVGLTEGFAPLVVMCGHSSQSTNNPYAAALECGACGGAAGGFNARVFATLCNLPEVREALSAEGIKIPDDTIFAAAE
HKTTVDELEWIYVPELSETAQEAFDCIEAIMPNVSQHANRERLMQLPHFKTKIKNPSKEAHRFAEDWSEIRPEWGLARNA
SFIIGQRELTRDCDLEGRAFLHNYDWKQDESGDILANIIAGPGTVAQWINLQYYASTVAPHYYGSGNKTTQTVTAGLGVM
QGNASDLLPGLPWQSVMQSDRETYHSPLRLLIVIQAPTKYIERLLNNNFTFREKVQNKWVRLASVDPEGRWKNW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAS0411 YP_042537.1 hypothetical protein Not tested vSa¥á Protein 0.0 47
SAR0453 YP_039901.1 hypothetical protein Not tested vSa¥á Protein 0.0 46