Gene Information

Name : yfeD (BH00890)
Accession : YP_032952.1
Strain : Bartonella henselae Houston-1
Genome accession: NC_005956
Putative virulence/resistance : Virulence
Product : Iron transport system membrane protein yfeD
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1108
EC number : -
Position : 114131 - 115036 bp
Length : 906 bp
Strand : +
Note : -

DNA sequence : 
ATGGTTGATCAATTACTTCTTCCTTTTCAATTTTCTTTTATGCTTAAGGGCATGCTTATCGTCATGATCCTTTCTGTTCC
AATGGCGATGCTTTCTTGTTTTCTTATTTTGAAAGGATGGGCGCTTTTAGGCGATGCAATTTCCCATGCAGTTTTCCCTG
GTGTTGTTATTGGTTATATGACAACACCGTGGGTAATAGCATTTTTGACTTCTTTTCCTTTTGCTTGGTTTCAGCATATG
CGTTCAGAGAATATTACAATGACTTTGATTACTTGCGGTGCTTTTGTCGCGGGTATGGTTTGTGCACTCGCAACAGGTTT
TTTAGGAGGCAATAGCCGTATCAAACAAGATACGGTGATGGGTGTTGTTTTTTCATCAATGTTTGGATTAGGGCTGGTTT
TGGCTACGGCTATTTATAGTAGCTTAGATTTGAACCATATTCTATTTGGTAATCTCTTGGGGGTTAACTGGCTTGATATT
ACGCAGACGGCGATCATTTCTGCTATTGTCACCTTTATTCTGGGCGCAAAATGGCGCGATTTCATGTTGTATATTTTTGA
TTTAGTTCAAGGTCGTGCAATGGGATTGAGGATAGCGGTACTCCACTATACTCTTTTGACGATGATTTCTCTCACGATTG
TTGCAGCTTTGAAGGCTGTTGGAATTGTTCTTGTTATTTCTTTATTGATAGCGCCAGGAGCAATTGCTTATCTTATCACG
AAGCGGTTTTCTTTTATGTTGGTGATCGCTATACTTGTTGCAGGTCTTTCTGGTTTTTTAGGAATTTATCTAAGCTTATT
TATCGGTTCTGATTCTGCTTCTACAATTGTATTGATTTTAACACTGATTTTTATCGCTATTTTCATGTGGATTTTCTTCC
GTCGAGTGACAGTTCAAGAAATTTGA

Protein sequence : 
MVDQLLLPFQFSFMLKGMLIVMILSVPMAMLSCFLILKGWALLGDAISHAVFPGVVIGYMTTPWVIAFLTSFPFAWFQHM
RSENITMTLITCGAFVAGMVCALATGFLGGNSRIKQDTVMGVVFSSMFGLGLVLATAIYSSLDLNHILFGNLLGVNWLDI
TQTAIISAIVTFILGAKWRDFMLYIFDLVQGRAMGLRIAVLHYTLLTMISLTIVAALKAVGIVLVISLLIAPGAIAYLIT
KRFSFMLVIAILVAGLSGFLGIYLSLFIGSDSASTIVLILTLIFIAIFMWIFFRRVTVQEI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitD YP_217784.1 iron transporter: fur regulated Virulence SPI-1 Protein 8e-62 51
sitD AAD41068.1 SitD Virulence centisome 63 pathogenicity island Protein 1e-61 51
sitD NP_461785.1 permease Virulence SPI-1 Protein 2e-61 51
sitD NP_457258.1 Iron transport protein, inner membrane component Virulence SPI-1 Protein 6e-62 50
sitD NP_806467.1 iron transporter inner membrane protein Virulence SPI-1 Protein 6e-62 50

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
yfeD YP_032952.1 Iron transport system membrane protein yfeD BAC0352 Protein 7e-62 51
yfeD YP_032952.1 Iron transport system membrane protein yfeD BAC0442 Protein 3e-52 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
yfeD YP_032952.1 Iron transport system membrane protein yfeD VFG0528 Protein 7e-62 51