Gene Information

Name : yfeC (BH00880)
Accession : YP_032951.1
Strain : Bartonella henselae Houston-1
Genome accession: NC_005956
Putative virulence/resistance : Virulence
Product : Iron transport system membrane protein yfeC
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1108
EC number : -
Position : 113272 - 114123 bp
Length : 852 bp
Strand : +
Note : -

DNA sequence : 
ATGTCTTGGTTACTTGAACCGTTGAGCTATCAATATATGGTTAATGCGATGTGGGTTTCCGGGTTAGTTGGATGTGTTTG
TGCCTTTCTTTCTGCTTTTTTAATGTTAAAAGGTTGGTCGTTAATTGGTGATGCGCTTTCTCATTCAATTGTTCCTGGTG
TAGCAGGGGCATATCTTTTAGGATTACCTTTTTCGCTTGGAGCTTTTTTTTCTGGTGGACTCGCTGCAGCAGCAATGCTC
TTTTTTAACCATCGAACAAAGCTGAAAGAAGATACCATTATTGGTCTCATTTTTTCTTCCTTTTTTGCTTTTGGCTTGTT
TCTCAAATCATTAAAGCCAATGGCTGTTAATATTGATACGATTGTTTTGGGAAATATTTTAGCAGTCAGTTCATCAGATA
TTATACAATTGGCTTTTATTGGTTTTTTTTCTTTGCTTATATTACTTTTGAAATGGAAAGATCTTCTTGTTTCTTTATTT
GATGAAACACACGCTCGCGCTATTGGATTAAACGTAAAGTTTTTAAAGATTCTTTTTTTCACATTGCTTGCTGCATGTAC
TGTTGCTGCACTGCAAACAGTTGGAGCTTTCTTAGTCATTTGTCTTGTCGTAACGCCAGGAGCAACAGCTTATCTTTTAA
GTGACCGTTTTGTGAGTATTTTAGTTATTGCAGTTATGATTGGGACATTCACAAGCGTATTAGGTGTTTATGTAAGTTAT
TTTTTGAATGCGCAAACTGGTGGTGTTGTTGTGCTTTTTCAAGCATTTCTGTTTATTTTAGCTTTTATTTTTGCTCCTAA
ACATGGATTTATTGCTGCGCGTTTACGTATAAATGCGGCAAAAAAGGTTTGA

Protein sequence : 
MSWLLEPLSYQYMVNAMWVSGLVGCVCAFLSAFLMLKGWSLIGDALSHSIVPGVAGAYLLGLPFSLGAFFSGGLAAAAML
FFNHRTKLKEDTIIGLIFSSFFAFGLFLKSLKPMAVNIDTIVLGNILAVSSSDIIQLAFIGFFSLLILLLKWKDLLVSLF
DETHARAIGLNVKFLKILFFTLLAACTVAALQTVGAFLVICLVVTPGATAYLLSDRFVSILVIAVMIGTFTSVLGVYVSY
FLNAQTGGVVVLFQAFLFILAFIFAPKHGFIAARLRINAAKKV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitC YP_217783.1 iron transporter: fur regulated Virulence SPI-1 Protein 9e-62 71
sitC NP_461784.1 permease Virulence SPI-1 Protein 9e-62 71
sitC NP_457257.1 Iron transport protein, inner membrane component Virulence SPI-1 Protein 8e-62 71
sitC NP_806466.1 iron transporter inner membrane protein Virulence SPI-1 Protein 8e-62 71
sitC AAD41067.1 SitC Virulence centisome 63 pathogenicity island Protein 7e-62 71
sitD AAD41068.1 SitD Virulence centisome 63 pathogenicity island Protein 1e-27 43
sitD YP_217784.1 iron transporter: fur regulated Virulence SPI-1 Protein 2e-27 43
sitD NP_457258.1 Iron transport protein, inner membrane component Virulence SPI-1 Protein 2e-27 43
sitD NP_806467.1 iron transporter inner membrane protein Virulence SPI-1 Protein 2e-27 43
sitD NP_461785.1 permease Virulence SPI-1 Protein 2e-27 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
yfeC YP_032951.1 Iron transport system membrane protein yfeC BAC0351 Protein 4e-62 71
yfeC YP_032951.1 Iron transport system membrane protein yfeC BAC0441 Protein 6e-54 61
yfeC YP_032951.1 Iron transport system membrane protein yfeC BAC0352 Protein 7e-28 43
yfeC YP_032951.1 Iron transport system membrane protein yfeC BAC0442 Protein 3e-26 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
yfeC YP_032951.1 Iron transport system membrane protein yfeC VFG0527 Protein 4e-62 71
yfeC YP_032951.1 Iron transport system membrane protein yfeC VFG0528 Protein 7e-28 43