Gene Information

Name : xerD (BH16350)
Accession : YP_034327.1
Strain : Bartonella henselae Houston-1
Genome accession: NC_005956
Putative virulence/resistance : Unknown
Product : integrase /recombinase xerD
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG4974
EC number : -
Position : 1890432 - 1891370 bp
Length : 939 bp
Strand : -
Note : -

DNA sequence :
ATGAAAAGTAATACTGTGATAGACCATTTTCTTGAGATGATGAGTGCTGAGCGAGGGGCTTGTGAGCATACGCTTGCAGC
TTATCAACGTGATTTACAGTGGGCACAAGACGAATTGTTTTCGCACTCTGTTTCACTTTTTTCAGCACAAAGAGAAGATT
TAATTGGTCTTTTGTCGCTTATGCATACTCTTGGTTTTGCGGCGTCTTCGCAAGCACGTCGTTTATCAACTTTACGTCAG
TTTTATCAATTTCTTTATGCCGAAGGATTGAGAGCAGATGATCCGTCTCATAATATTGATGCACCGCGTCAGGGGCGTCC
TTTGCCTAAAGTTGTTAGTGAGAATGTGGTGACGAAATTGCTCGATTTAGCGCAGTTGGAAGTCAATCAGGAAGATTATG
GGTCCAAAGGTCACTTTCGCGCATTGCGTTTACAATTGTTGATTGAAATGCTTTATGCAACAGGGCTGCGTATCAGTGAG
TTGGTGAGCCTTCCGGTGCAGGCTGTCCGCGGAAAAGATTACAGTATTTTGGTTCGAGGTAAGGGCAAAAAAGAGCGAAT
GGTGCTGTTATCAAAAAAAGCATGTCAAGTTCTTTCTCAGTGGTTAAGCTTGCGTGATCAGGGAAAATATGCTGAAAGTC
TTTATCTTTTTCCTGCACGTTCAGAGACAGGGTATATTGCTCGTCAGGTCGTTGCACGGGATTTGAAAAGTCTCGCTAGA
AGAGCAGGCATAAAAAGTGGTGGTTTTTCTCCCCATGTGTTGCGTCATGCTTTTGCTAGTCATCTTTTGCAAAATGGTGC
TGATTTGCGTGCCGTTCAACATTTGTTAGGTCACTCTGATATTGCAACCACTCAGATTTATACACATGTTTTGGAAGAAG
GACTTTATCGTTTAGTCAATGAACATCATCCACTTGCCGATGAGCAGAAGGCTAGGTAA

Protein sequence :
MKSNTVIDHFLEMMSAERGACEHTLAAYQRDLQWAQDELFSHSVSLFSAQREDLIGLLSLMHTLGFAASSQARRLSTLRQ
FYQFLYAEGLRADDPSHNIDAPRQGRPLPKVVSENVVTKLLDLAQLEVNQEDYGSKGHFRALRLQLLIEMLYATGLRISE
LVSLPVQAVRGKDYSILVRGKGKKERMVLLSKKACQVLSQWLSLRDQGKYAESLYLFPARSETGYIARQVVARDLKSLAR
RAGIKSGGFSPHVLRHAFASHLLQNGADLRAVQHLLGHSDIATTQIYTHVLEEGLYRLVNEHHPLADEQKAR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 2e-32 41
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 2e-32 41