Gene Information

Name : rplS (BH15810)
Accession : YP_034277.1
Strain : Bartonella henselae Houston-1
Genome accession: NC_005956
Putative virulence/resistance : Unknown
Product : 50S ribosomal protein L19
Function : -
COG functional category : J : Translation, ribosomal structure and biogenesis
COG ID : COG0335
EC number : -
Position : 1823838 - 1824278 bp
Length : 441 bp
Strand : -
Note : this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site

DNA sequence :
ATGAATATTATCGCGCAACTCGAAGCTGAACAATGTGCAAAAATTGCAGCAAAACGCCAACTGCCAGCTTTTCAGCCAGG
AGATACAGTACGCGTTATGGTGCGTGTTACCGAAGGTACCAGAACGCGTGTTCAGGCTTATGAAGGAGTTTGTATTGCAC
GTTCAGGCGGTGGTTTAAATGAAACCTTTACAGTGCGTAAGATTTCTTATGGTGAGGGCGTTGAGCGTGTGTTTCCGGTT
TATTCGCCCTTGATTGAGGGTGTTGAACTTGTACGCCGAGGAAAAGTGCGTCGGGCAAAGCTCTATTATCTGCGTAATTT
AAGAGGGAAGGCTGCGCGGATCACTGAAAAGAAAGATCAACGGAAAAAAAGTGCAAAGATTGTTGAGAAAGAACAAGAAG
CTCTTGTTAGAGTGGAGGCTCCAGCACACGCTACTGAATAA

Protein sequence :
MNIIAQLEAEQCAKIAAKRQLPAFQPGDTVRVMVRVTEGTRTRVQAYEGVCIARSGGGLNETFTVRKISYGEGVERVFPV
YSPLIEGVELVRRGKVRRAKLYYLRNLRGKAARITEKKDQRKKSAKIVEKEQEALVRVEAPAHATE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rplS CAA68924.1 ribosomal protein L19 Not tested Internalin Protein 3e-29 63
rplS AAS66827.1 50S ribosomal subunit protein Not tested SSR-1 Protein 1e-26 57