Gene Information

Name : yfeD (BQ00820)
Accession : YP_031807.1
Strain : Bartonella quintana Toulouse
Genome accession: NC_005955
Putative virulence/resistance : Virulence
Product : Iron transport system membrane protein yfeD
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1108
EC number : -
Position : 105138 - 106043 bp
Length : 906 bp
Strand : +
Note : -

DNA sequence : 
ATGATTAATCAATTACTCCTTCCTTTTCAGTTTTCTTTTATGCTTAAGGGCATGTTTATTGTCATAATCCTTTCTGTTCC
AATGGCGATGCTTTCTTGTTTTCTTATTTTGAAAGGATGGGCACTTTTAGGTGATGCAATTTCCCATGCGGTTTTTCCTG
GTGTCGTTTTTGGTTATATGACAACGCCGTGGGTGATAACATTTTTGACTTCTTTGCCATTTGCTTGGTTTCAGCATGTG
CGTCCGGCTAATGTTACAATGGCTTTGATTACTTGTGGTGCTTTTGTTGCGGGTATGATTTGTGCACTCGCAACAGGTTT
TTTAGGAAGCAATAGCCGTATTAAACAGGATACGGTGATGGGCGTTGTTTTTTCATCTATGTTTGGTTTGGGGCTGGTTT
TGGCAACGTCTATTTATAGTAGCTTAGATTTGAATCACATTTTATTTGGTAATCTTTTGGGTGTTAATTGGCTTGATATT
ACGCAGACGGCGATAATTTCTGCTGTTGTCACCTTCATTTTAGGAGCGAAATGGCGCGATTTTATGCTATACGTTTTTGA
TTCAGTTCAAGGTCGTGCAATGGGATTACGAATATCGGTACTCCACTATACCCTTTTAGCAATGATTTCTCTCACTATTG
TTGCGGCTTTGAAAGCTGTTGGAATTGTTCTCGTTATTTCTTTATTGATAGCGCCGGGAGCAATAGCTTATCTTATTACA
AAGCGGTTTTCTCTTATGTTGATAATCGCTATACTTATTGCTGCTTTTTCTGGTTTTTTAGGTGTTTATCTAAGTTTATT
TATTGGCTCTGATTCTGCTTCCACGATTGTATTGATTTTAACATTGATCTTTATAACCATTTTTATGTCGGTTTTCTTGC
GTCGAATTACCGTTCATGAAATTTGA

Protein sequence : 
MINQLLLPFQFSFMLKGMFIVIILSVPMAMLSCFLILKGWALLGDAISHAVFPGVVFGYMTTPWVITFLTSLPFAWFQHV
RPANVTMALITCGAFVAGMICALATGFLGSNSRIKQDTVMGVVFSSMFGLGLVLATSIYSSLDLNHILFGNLLGVNWLDI
TQTAIISAVVTFILGAKWRDFMLYVFDSVQGRAMGLRISVLHYTLLAMISLTIVAALKAVGIVLVISLLIAPGAIAYLIT
KRFSLMLIIAILIAAFSGFLGVYLSLFIGSDSASTIVLILTLIFITIFMSVFLRRITVHEI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitD AAD41068.1 SitD Virulence centisome 63 pathogenicity island Protein 3e-58 51
sitD YP_217784.1 iron transporter: fur regulated Virulence SPI-1 Protein 5e-58 51
sitD NP_457258.1 Iron transport protein, inner membrane component Virulence SPI-1 Protein 5e-58 51
sitD NP_806467.1 iron transporter inner membrane protein Virulence SPI-1 Protein 5e-58 51
sitD NP_461785.1 permease Virulence SPI-1 Protein 4e-58 51

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
yfeD YP_031807.1 Iron transport system membrane protein yfeD BAC0352 Protein 2e-58 51
yfeD YP_031807.1 Iron transport system membrane protein yfeD BAC0442 Protein 4e-47 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
yfeD YP_031807.1 Iron transport system membrane protein yfeD VFG0528 Protein 2e-58 51