Gene Information

Name : yfeC (BQ00810)
Accession : YP_031806.1
Strain : Bartonella quintana Toulouse
Genome accession: NC_005955
Putative virulence/resistance : Virulence
Product : Iron transport system membrane protein yfeC
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1108
EC number : -
Position : 104275 - 105141 bp
Length : 867 bp
Strand : +
Note : -

DNA sequence :
ATGATTTCTTGGTTGCTTGAACCACTGAGTTACCAATACATGGTGAATGCAATGTGGGTTTCGGGATTAGTTGGGTGTGT
TTGTGCCTTTCTTTCTGCTTTTTTGATGTTGAAAGGATGGTCGTTGATTGGTGATGCACTTTCCCATTCAATTGTTCCTG
GCGTAGCAGGCGCTTACCTTTTAGGATTACCTTTTTCACTTGGAGCTTTTTTTTCTGGTGGGCTTGCTGCGGCAGCAATG
CTCTTTTTTAACCACCGGACAAAGCTGAAAGAAGATACCATTATTGGTCTCATTTTTTCTTCTTTTTTTGCTTTTGGGTT
GTTTCTCAAATCATTAAAACCGATGGCTGTTAATATTGATACGATTGTTTTGGGAAATATTTTAGCAATCAGTTCATCAG
ATGTTATACAATTGGCTTTTATTGGTTTTTTTTCTTTGCTTATATTGCTTTTGAAATGGAAAGATCTTCTTGTTTCTTTA
TTTGATGAAACGCATGCACGCGCTATTGGATTAAATGTAAAGTTTTTAAAGATTCTCTTTTTCACATTGCTTGCTGCTTG
TACTGTTGCCGCTATGCAAACAGTTGGAGCGTTTTTGGTCATTTGTCTTGTTGTGACGCCTGGGGCAATAGCTTATCTTT
TAAGTGATCGTTTTGTGAATGTTTTGGTCATTGCAGTTATGATTGGGACATTCACAAGCATATTGGGTGTTTATGTGAGT
TATTTTTTGAATGCGCAAACGGGTGGTGTTGTTGTGCTTTTTCAAGCGCTTCTGTTTATTTTAGCTTTTATTTTTGCTCC
TAAACACGGTTTTATTGCTGCGCGCTTACGTATCAATGCGGCAAAAAGAGGTGTAGTGATATCATGA

Protein sequence :
MISWLLEPLSYQYMVNAMWVSGLVGCVCAFLSAFLMLKGWSLIGDALSHSIVPGVAGAYLLGLPFSLGAFFSGGLAAAAM
LFFNHRTKLKEDTIIGLIFSSFFAFGLFLKSLKPMAVNIDTIVLGNILAISSSDVIQLAFIGFFSLLILLLKWKDLLVSL
FDETHARAIGLNVKFLKILFFTLLAACTVAAMQTVGAFLVICLVVTPGAIAYLLSDRFVNVLVIAVMIGTFTSILGVYVS
YFLNAQTGGVVVLFQALLFILAFIFAPKHGFIAARLRINAAKRGVVIS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitC NP_461784.1 permease Virulence SPI-1 Protein 5e-61 71
sitC NP_457257.1 Iron transport protein, inner membrane component Virulence SPI-1 Protein 5e-61 71
sitC NP_806466.1 iron transporter inner membrane protein Virulence SPI-1 Protein 5e-61 71
sitC AAD41067.1 SitC Virulence centisome 63 pathogenicity island Protein 4e-61 71
sitC YP_217783.1 iron transporter: fur regulated Virulence SPI-1 Protein 5e-61 71
sitD AAD41068.1 SitD Virulence centisome 63 pathogenicity island Protein 5e-28 42
sitD NP_461785.1 permease Virulence SPI-1 Protein 7e-28 42
sitD NP_457258.1 Iron transport protein, inner membrane component Virulence SPI-1 Protein 6e-28 42
sitD NP_806467.1 iron transporter inner membrane protein Virulence SPI-1 Protein 6e-28 42
sitD YP_217784.1 iron transporter: fur regulated Virulence SPI-1 Protein 6e-28 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
yfeC YP_031806.1 Iron transport system membrane protein yfeC BAC0351 Protein 2e-61 71
yfeC YP_031806.1 Iron transport system membrane protein yfeC BAC0441 Protein 4e-54 61
yfeC YP_031806.1 Iron transport system membrane protein yfeC BAC0442 Protein 2e-26 43
yfeC YP_031806.1 Iron transport system membrane protein yfeC BAC0352 Protein 3e-28 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
yfeC YP_031806.1 Iron transport system membrane protein yfeC VFG0527 Protein 2e-61 71
yfeC YP_031806.1 Iron transport system membrane protein yfeC VFG0528 Protein 3e-28 42