Gene Information

Name : BAS0540 (BAS0540)
Accession : YP_026818.1
Strain : Bacillus anthracis Sterne
Genome accession: NC_005945
Putative virulence/resistance : Virulence
Product : DNA-binding response regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 578669 - 579340 bp
Length : 672 bp
Strand : +
Note : -

DNA sequence : 
ATGCGCTTACTCGTAGTAGAAGATAATGCTTCTTTATTAGAGTCCATTGTCCAAATATTATGCGATGAATTTGAAGTAGA
TACGGCATTGAATGGAGAAGATGGATTGTTTTTAGCGCTTCAAAATATATATGATGCAATTTTGCTTGATGTGATGATGC
CAGAAATGGATGGATTTGAAGTGATTCAAAAAATACGTGATGAAAAGATTGAAACACCTGTCTTATTTTTGACAGCGAGA
GATTCTTTAGAAGATCGCGTGAAAGGGTTGGATTTTGGCGGGGATGACTATATCGTTAAGCCGTTTCAGGCCCCAGAATT
AAAAGCAAGAATTCGTGCTTTATTAAGGCGAAGTGGTAGTTTAACAACGAAGCAGACTATTCGCTATAAAGGGATTGAAC
TGTTCGGAAAAGATAAAGATGTTCAAGTAGATGGACAAAGTATGAAGCTAACATTAAAACAATATGAGCTTCTAGAGTAC
CTTGTTCAAAATAGCGGAAAGATTTTAATGAGGGAACAAATTTTTGATCGTGTCTGGGGATTCGATTCAGATACGACAGT
AGCGATTGTAGAAGTGTATGTACATCATTTACGTAAAAAATTAGAGCCATTCGGTTATCAGAAAGATATTCAAACCGTTC
GTGGTATTGGATATATATTAAAAGAACAATGA

Protein sequence : 
MRLLVVEDNASLLESIVQILCDEFEVDTALNGEDGLFLALQNIYDAILLDVMMPEMDGFEVIQKIRDEKIETPVLFLTAR
DSLEDRVKGLDFGGDDYIVKPFQAPELKARIRALLRRSGSLTTKQTIRYKGIELFGKDKDVQVDGQSMKLTLKQYELLEY
LVQNSGKILMREQIFDRVWGFDSDTTVAIVEVYVHHLRKKLEPFGYQKDIQTVRGIGYILKEQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 1e-34 43
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 3e-34 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BAS0540 YP_026818.1 DNA-binding response regulator BAC0125 Protein 4e-36 45
BAS0540 YP_026818.1 DNA-binding response regulator AE015929.1.gene1106. Protein 4e-36 43
BAS0540 YP_026818.1 DNA-binding response regulator BAC0638 Protein 7e-34 43
BAS0540 YP_026818.1 DNA-binding response regulator NC_003923.1003417.p0 Protein 8e-41 42
BAS0540 YP_026818.1 DNA-binding response regulator NC_013450.8614146.p0 Protein 8e-41 42
BAS0540 YP_026818.1 DNA-binding response regulator NC_002951.3238224.p0 Protein 8e-41 42
BAS0540 YP_026818.1 DNA-binding response regulator NC_007793.3914065.p0 Protein 8e-41 42
BAS0540 YP_026818.1 DNA-binding response regulator NC_002758.1121390.p0 Protein 8e-41 42
BAS0540 YP_026818.1 DNA-binding response regulator NC_010079.5776364.p0 Protein 8e-41 42
BAS0540 YP_026818.1 DNA-binding response regulator NC_002952.2859858.p0 Protein 8e-41 42
BAS0540 YP_026818.1 DNA-binding response regulator NC_007622.3794948.p0 Protein 8e-41 42
BAS0540 YP_026818.1 DNA-binding response regulator BAC0308 Protein 1e-32 41
BAS0540 YP_026818.1 DNA-binding response regulator BAC0197 Protein 2e-32 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BAS0540 YP_026818.1 DNA-binding response regulator VFG0596 Protein 4e-35 43
BAS0540 YP_026818.1 DNA-binding response regulator VFG1386 Protein 3e-41 43
BAS0540 YP_026818.1 DNA-binding response regulator VFG1390 Protein 5e-39 42
BAS0540 YP_026818.1 DNA-binding response regulator VFG1389 Protein 1e-36 41