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Name : clpB (pc0728) Accession : YP_007727.1 Strain : Candidatus Protochlamydia amoebophila UWE25 Genome accession: NC_005861 Putative virulence/resistance : Virulence Product : endopeptidase Clp ATP-binding chain Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 883222 - 885828 bp Length : 2607 bp Strand : - Note : strongly similar to endopeptidase Clp ATP-binding chain DNA sequence : ATGAATCAAAATTTCACAGATCATGTTGCGGAAGCTATTCAAGCCGCTTTTGCAGAAGCACAACGTTTAAATCACACAGA AGTTACTGAAAATCACCTGCTATGGGCTTTTCTCAAAGATAAAGAAGGATATTTTTACTCGCTTTTAAATGGGCTGGGGA CAAATCCGCAAAAATTATTTCAAGAGACTGAAAACAATATTCACCATTTACCAACTTACTCGGGTGGAGGGCAAGCCCCA AATCCTTCCAGAAGCCTACAAAGTCGCATTGTCGATGCTCAAAATATCGCTCAAAGCTGGAAAGATACTTATACGAGCAG CGATCATTTTTTAATCTCTTATTGGAAAAATGGTGGAGATCCTTTTGCTTCTTGGAAAAAGAAAACTACTATCTCTTTAG AAAAGCTGGAAGAACAAATAAAAAAAATTCGAGGTGATCGTCATATGGACTCTCCTAGCTCCGAATCAAATTTACAAGCT CTAGAAAAATATTGCAAAAATCTCACAGATCTGGCTCGTCAAGGTAAGCTCGACCCTGTGATTGGAAGAGATGAAGAAAT TAGACGAACCATGCAAGTTTTGTGTAGACGAACCAAAAATAATCCTATGCTTATTGGAGATCCGGGAGTTGGTAAAACAG CGATTGCTGAAGGATTAGCTCAACGCATAGTCCAGCAAGATATTCCCGATTCTTTAAAAAATAAACAGCTACTTGCGTTG GATATGGGAAGTTTAATTGCCGGTACAAAGTACCGAGGAGAATTTGAAGAAAGGCTGAAAGGTATTTTACAAGACATTGA GAAAAGCGAAGGGCAGATCATCCTTTTTATTGATGAAGTGCATACTTTAATTGGAGCTGGCGCGACAGATGGAGCGATGG ATGCCGCCAATTTATTGAAACCCGCACTTGCGAGAGGTATTTTACATTGCATCGGAGCGACTACCCTTAACGAATATCAA AAATACATTGAAAAGGATGCTGCTCTTGAAAGACGCTTTCAACTTGTCTTAGTTAATGAACCAACTATAGAAGACTCGAT TGCAATTTTGAGAGGTTTAAGAGAAAGATATGAAATTTACCATGGGGTGCATATCACAGAGTCTGCGATCCACGCTGCCG TGTTATTGTCTTCTCGCTACATTACAGATCGTCGTCTGCCCGACAAAGCAATCGATTTGATCGACGAATCAGCTAGCTTA ATTCGTATGCAACTCGGAAGCCGCCCTCTTCCCATCGACAATAAAGAACGAGAGCTGGCGGGCCTAATTGTGGAACAAGA AGCGATGAAACGAGAAAGCACTCCCCTAGCTAAAAATGAAGTAGAAAAATTAGAAGGGCGCATTGCTCAAATCAAGGAAG AACTGAAAATTTTACGTGAGCAATGGGATCAAGAGAAAAAAATTATCGAATCTTTAAAAGAGAAAAAAGACAAACTTGAG AAATTGCGTTTTGAAGAAGAAGCTGCAGAACGTAAAGCCGACTATAACCGTGTAGCAGAGCTGCGCTACAATTTGATCCC TCAACTACAAAAAGAGATTGAAGAGGCACAGACTCAGCTTAATAACAAACCTAATAGACTTTTGCAGGAAGAAGTAGACG AGTCCCTCATTGCTCAAATCGTTTCTAAATGGACGGGTATCCCCGTTCATAAAATGTTAGAGGGTGAAGCTGAGCGTCTC TTACATCTTGAAAACGAACTTGAAAAAAGAGTTGTTGGTCAAGAAATAGCTGTTTCAGCTGTGAGTGAAGCAATTCGTCG TTCAAGGTCTGGACTAAGTGATCCTAATCGGCCAATGGGTGTTTTTCTTTTCCTGGGTCCGACAGGCGTTGGCAAAACAG AGCTTGCTAAAGCGTTAGCTTTTCAATTGTTTAACCAAGATGAAGCATTGATTCGGCTAGACATGTCTGAATACATGGAA AAACACACGGTTTCTAAATTGATTGGCTCCCCTCCCGGGTATATTGGGTATGAGGAAGGAGGGCAATTAACAGAGGCGCT GCGAAGAAGGCCTTATGCCGTTGTTCTGTTTGATGAGATTGAAAAAGCTCACCCTGATGTATTTAATATTTTACTTCAGG TGTTCGATGATGGACGCTTAACAGATAGTAAAGGGCGTGTAGTCAATTGTAAAAATGCCCTCTTCATCATGACATCAAAT ATTGGATCTGACCTCTTATTAGAAAAGATGGAGCAAAACAAACAAGGCCTTGCTAAAGACGAAATTATGTTGGTCTTAGA TCCTGTAATCAAAAAACATTTCCGCCCAGAATTTATTAACCGCTTAGACGATATTCTTCCTTTTGTTCCTCTACGTGAAC ATGATATGGAAAAAATTGTCGTCATTCAACTGAATTTACTTGCTAAGCGTTTAAAAGATCGAGATGTCGAATTAATGTGG ACACCTCAAGCATTGGCACACTTAGCCAAAGAAGGATATGATCCTCATTTTGGAGCACGTCCATTAAAAAGGTATATTCA GCAAGAAGTTATTAATCAGTTATCGACTGCAATCTTGGAAGGTAAAATTCCTCCTCATAGCCATATCAAACTTGAATTGG AAGGAAACACAATTCGATTTAAATCGTTTGCTGGAGGAAAAAATTAA Protein sequence : MNQNFTDHVAEAIQAAFAEAQRLNHTEVTENHLLWAFLKDKEGYFYSLLNGLGTNPQKLFQETENNIHHLPTYSGGGQAP NPSRSLQSRIVDAQNIAQSWKDTYTSSDHFLISYWKNGGDPFASWKKKTTISLEKLEEQIKKIRGDRHMDSPSSESNLQA LEKYCKNLTDLARQGKLDPVIGRDEEIRRTMQVLCRRTKNNPMLIGDPGVGKTAIAEGLAQRIVQQDIPDSLKNKQLLAL DMGSLIAGTKYRGEFEERLKGILQDIEKSEGQIILFIDEVHTLIGAGATDGAMDAANLLKPALARGILHCIGATTLNEYQ KYIEKDAALERRFQLVLVNEPTIEDSIAILRGLRERYEIYHGVHITESAIHAAVLLSSRYITDRRLPDKAIDLIDESASL IRMQLGSRPLPIDNKERELAGLIVEQEAMKRESTPLAKNEVEKLEGRIAQIKEELKILREQWDQEKKIIESLKEKKDKLE KLRFEEEAAERKADYNRVAELRYNLIPQLQKEIEEAQTQLNNKPNRLLQEEVDESLIAQIVSKWTGIPVHKMLEGEAERL LHLENELEKRVVGQEIAVSAVSEAIRRSRSGLSDPNRPMGVFLFLGPTGVGKTELAKALAFQLFNQDEALIRLDMSEYME KHTVSKLIGSPPGYIGYEEGGQLTEALRRRPYAVVLFDEIEKAHPDVFNILLQVFDDGRLTDSKGRVVNCKNALFIMTSN IGSDLLLEKMEQNKQGLAKDEIMLVLDPVIKKHFRPEFINRLDDILPFVPLREHDMEKIVVIQLNLLAKRLKDRDVELMW TPQALAHLAKEGYDPHFGARPLKRYIQQEVINQLSTAILEGKIPPHSHIKLELEGNTIRFKSFAGGKN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 9e-133 | 45 |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 8e-105 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpB | YP_007727.1 | endopeptidase Clp ATP-binding chain | VFG2076 | Protein | 5e-112 | 44 |
