Gene Information

Name : pc0528 (pc0528)
Accession : YP_007527.1
Strain : Candidatus Protochlamydia amoebophila UWE25
Genome accession: NC_005861
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 660745 - 661467 bp
Length : 723 bp
Strand : +
Note : -

DNA sequence :
GTGATGGAAGTATCAAGATCCAATCTTATAGAGCAGCTTAAAGAGCATTTACCTCATCAGCCAGTCTTTTATTCTAAAGC
GGAAAATGAACAGGTTTTAGCTTTAATCAAAGAAGTCGTTAAAGACAGGCCGACTGACGGTTATCGTAGGGTCCATGCGA
TTGTCAATAGCCTTCTCAAAGAGAAAAAACTTAAAGTCATTAATCATAAGCGGGTTTTTAGACTGATGAGGCAGCATCAT
CTTTTGCTACAAAGGCCAAACAGGCGTCCTAAACGCTTACATACAGGCAAAGTAGAGACTCTCTACAGCAATACACGATG
GTGCTCAGACAGCTTCTCTATTCAATGCTTAAATGGTGATCGTGTTCATGTCGCCTTCTCGTTGGATACGTGTGACAGAG
AAGTCATGCGTTATATTGCCTCTACAATAGGTATTGATGGGCAGATGATTCGAGATTTGATGCTTGAGACTATTGAATAT
AGATTTGAACAGCCAAAAGCTAGAGTACCTCTTGAATGGCTCTCTGATAATGGCAGCTGTTACACGGCTAAAGAAACTGT
CAATTTTGGTAGAATGCTTGGTTTAACCATTAGAACCACGCCACCTTATAGTCCAGAAAGTAATGGCATGGCAGAAGCTT
TTGTCAAAACTTTTAAAAGAGATTATGTTTATTTCGGCAATCTGGCAAGTGCTGAAGCTGTTTTGCAGCAATTGCCTATT
TGA

Protein sequence :
MMEVSRSNLIEQLKEHLPHQPVFYSKAENEQVLALIKEVVKDRPTDGYRRVHAIVNSLLKEKKLKVINHKRVFRLMRQHH
LLLQRPNRRPKRLHTGKVETLYSNTRWCSDSFSIQCLNGDRVHVAFSLDTCDREVMRYIASTIGIDGQMIRDLMLETIEY
RFEQPKARVPLEWLSDNGSCYTAKETVNFGRMLGLTIRTTPPYSPESNGMAEAFVKTFKRDYVYFGNLASAEAVLQQLPI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SF2985 NP_708759.1 insertion element IS2 transposase InsD Not tested SHI-1 Protein 9e-37 47
unnamed AAL67379.1 transposase-like protein Not tested PAI II CFT073 Protein 6e-37 47
tnpF AAD44739.1 TnpF Not tested SHI-2 Protein 8e-37 47
unnamed CAC39284.1 hypothetical protein Not tested LPA Protein 3e-37 46
aec49 AAW51732.1 Aec49 Not tested AGI-3 Protein 3e-35 46
ECO111_3773 YP_003236109.1 putative IS2 transposase InsAB Not tested LEE Protein 2e-35 44
c5197 NP_757045.1 transposase insD Not tested PAI II CFT073 Protein 3e-27 43
insD YP_854263.1 IS2 transposase Not tested PAI I APEC-O1 Protein 3e-27 43
insD AAZ04432.1 IS2 transposase Not tested PAI I APEC-O1 Protein 2e-27 43
unnamed CAC39283.1 hypothetical protein Not tested LPA Protein 3e-37 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
pc0528 YP_007527.1 hypothetical protein VFG0649 Protein 4e-37 47