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Name : gspE (pc1897) Accession : YP_008896.1 Strain : Candidatus Protochlamydia amoebophila UWE25 Genome accession: NC_005861 Putative virulence/resistance : Virulence Product : general secretion pathway protein Function : - COG functional category : N : Cell motility COG ID : COG2804 EC number : - Position : 2258106 - 2259737 bp Length : 1632 bp Strand : - Note : strongly similar to protein of the general secretion pathway DNA sequence : ATGACGGGCGATAATGAGGAAACAGGAAATAAAGAGTTTTTATTAAAAGAAAAATTAGGAGGAGAACAAGCTCAAGCGAA GCTTGCCGAACAATTTGGGATGACTTGTTACCTTGACTTGTCTTCTTTTCGAGTAAGTAAAGAGCGTTATAGACAAGTTC CTTATGCATTTGCCAAAAAGCATATTATTCTTCCTGTGGAAGATCAGGGAACTATCGTAGTTGTCGCTGTGGCTGATCCT CTTAATTTAGCTCCACTAGAAGAGCTTCGGTTTTTTTTAAACGCTGAAATTGAAGCCGTTTATAGCCCTCGTGATGTGAT TTTGTCAGCTATACATGATTGTTATAACACTGAACATGGTGCAGCTTCGCAACTGATTGCTGGGATGGGAGACAAAAGCG AAGAAGGAAAAGAAGGCGATATTGAAATTTTTGATCTTTTTGATCAAAGCAAGCTGCAATCCCCAGTTGTCCAGCTCCTT AATTTAATTTTAACAGAAGCCATTCAGCAAGGGGCTTCTGATATTCATTTTGAGCCTTCAGAAAATGGAATGCGGGTTCG ATATCGCATTGATGGAGTTTTGCAAAATAGGCATGCTCCTTCGCAAGATTACCAAACTCAATTATTGACTCGTATCAAAG TCATGTCCAAATTAGATATTGCCGAGCATCGTTTGCCGCAAGATGGACGTATCAAATTACGTATGGGAAGACGGGAAGTA GATTTTCGTGTAAGTACAGTGCCAATTGCAGGAGGCGAGCGTATTGTTTTGCGTATTTTAGATAAAGGAAATGTCTTACT TGGATTGGATAAAATTGGGATGCTTCCTTCTGTTTTTGAGCAATTTCAAAAGCTCGTTTCATTACCAGAAGGTATTGTTT TAGTGACGGGGCCAACGGGAAGCGGAAAAACGACAACTCTTTATAGTGCTATTTGTGATATGACAAATGATGAGATCAAC ATCATGACCATTGAAGATCCAGTAGAGTATAATTTAAGAGGGATTGCACAAATTGGAGTCCACCATAAAATTAAGCTCGA TTTTGCTACGGGTTTAAGACATATCTTACGTCAAGACCCCGATGTGATTATGGTGGGAGAAATTAGAGATAAAGAAACAG CAGAAATAGCCATTCAAGCTGCTTTGACAGGGCACCTCGTTTTAAGTACGCTTCATACCAATGATGCTCCTTCTGCGATT ACTCGCCTTGTCGATATGGGAATTGAACCTTATTTATTGTCTTCTTGTATTGTAGGTGTTCTAGCTCAAAGGCTTGTCAG AAGAATATGTTCAGATTGTAAAGAAACTTATGAACCGAGTCCTCGAGAGTTGCAAAGTTTGGGAATTCGGTCAGAAGAAT TGAAAAATGGTTTCCTCTATCGAGGTAAAGGGTGTTCCTCTTGTTATGGAACTGGGTTTAAAGGGCGTCAGGGCGTTTAT GAGTTAATGCCAGTTAATCATGCAATCAATAAACAAATTGTCCAAAGTCCAGATGCCATAGAAATGCGTAAAGTGGCTTT GTCACAAGGAATGGTGAGCTTACTTGGTCATGGAGCAGAACTGGTTAAACAAGGTGTTTCGACTGTAGCAGAAGTACTGC GCGTGGCAAGAGGAATTGAGGAAGAAGGGTAG Protein sequence : MTGDNEETGNKEFLLKEKLGGEQAQAKLAEQFGMTCYLDLSSFRVSKERYRQVPYAFAKKHIILPVEDQGTIVVVAVADP LNLAPLEELRFFLNAEIEAVYSPRDVILSAIHDCYNTEHGAASQLIAGMGDKSEEGKEGDIEIFDLFDQSKLQSPVVQLL NLILTEAIQQGASDIHFEPSENGMRVRYRIDGVLQNRHAPSQDYQTQLLTRIKVMSKLDIAEHRLPQDGRIKLRMGRREV DFRVSTVPIAGGERIVLRILDKGNVLLGLDKIGMLPSVFEQFQKLVSLPEGIVLVTGPTGSGKTTTLYSAICDMTNDEIN IMTIEDPVEYNLRGIAQIGVHHKIKLDFATGLRHILRQDPDVIMVGEIRDKETAEIAIQAALTGHLVLSTLHTNDAPSAI TRLVDMGIEPYLLSSCIVGVLAQRLVRRICSDCKETYEPSPRELQSLGIRSEELKNGFLYRGKGCSSCYGTGFKGRQGVY ELMPVNHAINKQIVQSPDAIEMRKVALSQGMVSLLGHGAELVKQGVSTVAEVLRVARGIEEEG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 2e-92 | 44 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 2e-92 | 44 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| gspE | YP_008896.1 | general secretion pathway protein | VFG0182 | Protein | 7e-95 | 51 |
| gspE | YP_008896.1 | general secretion pathway protein | VFG2426 | Protein | 4e-77 | 44 |
| gspE | YP_008896.1 | general secretion pathway protein | VFG2048 | Protein | 4e-93 | 43 |
| gspE | YP_008896.1 | general secretion pathway protein | VFG1876 | Protein | 3e-88 | 42 |
