|
Name : tkt (pc1514) Accession : YP_008513.1 Strain : Candidatus Protochlamydia amoebophila UWE25 Genome accession: NC_005861 Putative virulence/resistance : Unknown Product : transketolase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0021 EC number : 2.2.1.1 Position : 1810308 - 1812341 bp Length : 2034 bp Strand : - Note : catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate; can transfer ketol groups between several groups; in Escherichia coli there are two tkt genes, tktA expressed during expo DNA sequence : TTGGTGAAAAATATGAGCAGCCATCTTCAAGTTTCAGTGCCTCAACCTCTCGATTCTGAGCAAAAGCAAATCATGAAACA AATAGCAAATACCATTCGAGGTCTTTCGATGGATGCTGTTCAAAAAGCAGATTCAGGTCATCCAGGGCTTCCAATGGGAT GTGCTGAACTTGGTGCATACTTATATGGTTATTATCTTAAGCAAAATCCCAAAAATTCTAAATGGCTCAATCGTGATCGT TTTATTTTATCTGCTGGACACGGATCTATGTGGTTATATTCTTGTCTACACTTAGCTGGTTACAAAATCACGTTGGAAGA CATCAAAAATTTCAGGCAGCTTCATTCCCCAACTCCAGGCCATCCAGAATCATTTATGACGGATGGTGTGGAAACAACGA CGGGGCCTTTAGGGCAAGGTGTAGGTAATGCTGTCGGTCAAGCACTTGGATTTAAAATTCTTGGAGAAAAATTTAACACA GAAAAGCATCCCATTTTTAATAATAAAGTTTATGTGTTAATGGGTGATGGTTGTGTAATGGAAGGGATTTCTTCAGAAGT ATCTTCATTAGCTGGTCATTTAAAATTGAATAATTTGGTTGCTATTTATGATGCGAATCACGTTTCTTTAGATGGACCGT TAGCAGAAAGTTCTTCAGAAGATACTAAAACTCGTTATAAGGCTTATGGTTGGGATGTATTTGAAATAGATGGAAACGAT ATTGAAGCTATTGATACTGTATTTTCTCAAATTCGACACTATCAAGAAAAGCCTTGTTTAGTTATAGCTCATACTATTAT TGGGAAAGGAGCCCCGAATAAAGGGGGGACTTATAAAGCCCATGGATCACCTCTTGGAGTAGAAGAAATTAAAGCAGCTA AAGATGAACTGGGCATTCCTCAAGAAGATTTCTATGTTCCTCAAGCTGTCATCAACTACTTTCAAAATAAGCTTGTTTCC GATGCAAAAGAACAAAATGAGTGGAAGCAAATATTTGAAGAATGGGCAAAAGAAAATCCTTCTAAATTCCAAGAATTAGA AGTCATGCTACATCACAAACTTCCCGACGATTTCGAGCAAAAGCTTCAGCATCTGATGATTAAAGCTCCAATTTCCGGAC GTAAAGCTTCTCAAGAAGTTCTCAATAGTTTAGCAGATATGATTCCTCAATTATACGGAGGGTCAGCTGATTTATCTTCA TCCGATATGACAATGTTAAAGAAGTTTTCTTTAATTGCTCCTAACGAATTTCATGGACGCAATATTAAGTTCGGTGTACG AGAATTTGGGATGGCGACAATAGCGACTGGTCTTTATCAAACTGGAATGATTCTTCCATTTGTAGGAACTTTTTTAACTT TTTCTGATTATATGCGTAATGCAATTCGCTTGGCGGCTTTACAACATGCACAAGTTTTTTATCAATTTACCCATGATTCT ATTTTCTTAGGGGAAGATGGGCCTACTCACCAACCTGTTGAACATTATGCAGCTTTAAGAGCTATTCCTCAACTACAAGT AATCCGCCCAGCAGATAGTTATGAAGTAAAAATGTCTTGGATTGCAGCTTTGCAATATAAAGGCCCTACGGCTTTGATTT TGTCTCGACAGAATTTACCTGATTTAGCTGGGACAAACATTCCTTATGTTGAAGGAATGGGAAGAGGGGCTTATATCGTA AAAAAAGAAAAAGGAAAGGCTGACTTTACTTTAGTTGCAACTGGCTCGGAATTGAGTTTAGCGATGAACGTAGCAAATGA ATTAGAAAAACTTGGTAAAAATGTCCGGGTTATTTCTATGCCTTGCTGGGCTTTATTTGAAAAGCAACCTATAGATTATA AAGAAAGTCTGTTTGGTGGAGATATTGGTAAAAGGGTCAGTATTGAAGCTGGTGTTGACCTTGGATGGCATAAATACATT GGCCGTGATGGTATTGCAATTTGTATGGAACATTTTGGAGCCTCAGCTCCTGCGGGTGTATTAGCAAAAGAATTTGGTTT TACCGTTGAGGCTATACTTGAACGTATTTTATAG Protein sequence : MVKNMSSHLQVSVPQPLDSEQKQIMKQIANTIRGLSMDAVQKADSGHPGLPMGCAELGAYLYGYYLKQNPKNSKWLNRDR FILSAGHGSMWLYSCLHLAGYKITLEDIKNFRQLHSPTPGHPESFMTDGVETTTGPLGQGVGNAVGQALGFKILGEKFNT EKHPIFNNKVYVLMGDGCVMEGISSEVSSLAGHLKLNNLVAIYDANHVSLDGPLAESSSEDTKTRYKAYGWDVFEIDGND IEAIDTVFSQIRHYQEKPCLVIAHTIIGKGAPNKGGTYKAHGSPLGVEEIKAAKDELGIPQEDFYVPQAVINYFQNKLVS DAKEQNEWKQIFEEWAKENPSKFQELEVMLHHKLPDDFEQKLQHLMIKAPISGRKASQEVLNSLADMIPQLYGGSADLSS SDMTMLKKFSLIAPNEFHGRNIKFGVREFGMATIATGLYQTGMILPFVGTFLTFSDYMRNAIRLAALQHAQVFYQFTHDS IFLGEDGPTHQPVEHYAALRAIPQLQVIRPADSYEVKMSWIAALQYKGPTALILSRQNLPDLAGTNIPYVEGMGRGAYIV KKEKGKADFTLVATGSELSLAMNVANELEKLGKNVRVISMPCWALFEKQPIDYKESLFGGDIGKRVSIEAGVDLGWHKYI GRDGIAICMEHFGASAPAGVLAKEFGFTVEAILERIL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tktA | AAO17218.1 | TktA | Not tested | tcd island | Protein | 1e-128 | 46 |
| APECO1_2641 | YP_859417.1 | transketolase | Not tested | Not named | Protein | 5e-127 | 45 |
