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Name : clpC (pc1511) Accession : YP_008510.1 Strain : Candidatus Protochlamydia amoebophila UWE25 Genome accession: NC_005861 Putative virulence/resistance : Virulence Product : endopeptidase ATP-binding chain clpC Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 1805005 - 1807548 bp Length : 2544 bp Strand : - Note : strongly similar to endopeptidase ATP-binding chain clpC DNA sequence : ATGTTTGATAAATTTACGAATCGTGCAAAACAGGTTATTAAATTAGCCAAAAAAGAAGCGCAGCGACTTAATCATAATTA TTTAGGCACAGAGCATGTCCTTTTAGGACTACTTAAACTAGGCCAAGGCGTTGCGGTTAACGTTTTACGAAACCTTAATA TTGATTTTGAAACCGTGCGCAGTGAAGTAGAAAAATTAGTGGGATACGGACCTGAAATCCAAGTTTACGGAGATCCAGCC TTAACTGGAAAAGTAAAAAAAGTTTTTGAGTTTGCAAATGAAGAAGCAGCCAATCTAAATCATAATTATGTGGGGACAGA GCATTTATTGCTTGGTTTATTAAGACAAACAGATGGCGTTGCCGCACAAGTTCTAGAAAATTTAAATGTCAATTTGAAAG AAGTGCGTAAAGAGGTTTTAAAAGAACTTGAAACTTTTAACTTACAACTTCCTCCCATTAGTGGAGCTGGTATTAGTCCA AGTAACCCATCACCTGGCAGTGGGGGAAAAGGTTCTTACGAAAAAGTAGCTGCTGGAACTGCTAATGATAAAATGCCGGC TTTAAGAGCTTATGGACACGATCTAACTGAAATGTGTCGCGAAGGCAAGATGGATCCGGTCATAGGTCGAAAAGAAGAAA TTGAGCGACTCATTTTAATTCTGTGTCGGCGTCGAAAAAATAATCCAGTTTTAGTCGGAGAAGCAGGAGTCGGTAAAACT GCCATAGTAGAAGGGCTTGCTCAAGCTATTGTAAAAGGGGATGTGCCTGATACTTTACGTAAGAAAAAATTAATTACACT TGATTTAGCTTTAATGATTGCCGGTACTAAATACAGAGGACAATTTGAAGAACGTATTAAAGCTGTTATGGATGAAATCA AGAAAAATGGAAATGTTTTACTGTTTATTGATGAATTGCATACAATTGTTGGCGCAGGTGCTGCTGAAGGAGCTATAGAT GCTTCAAATATCTTAAAACCAGCTCTTTCTCGTGGAGAATTGCAATGTATTGGCGCAACAACAATTGATGAATATCGGAA GCACATTGAAAAAGATGCAGCTTTAGAACGTCGCTTCCAAAAAATCTTAGTTGCTCCTCCAAGTGTTGATGATACTATTG AAATTCTTTATGGTTTAAAACCTGAGTATGAGAAACATCATAAAGTCATTTTCACTAACCAAGCAATTCGTGCTGCCGCG GTCTTATCGGATCGCTATATTCATGGGCGTTTTCTACCAGATAAGGCGATTGATTTAATTGATGAGGCAGGCGCCAAACT GCGTATCTCTATGATGAATCAGCCACAAGACATTAGTAAGTATGAGTCAGAAATAGAGGCCACAAGGTTGGCTAAAGAAG AATCTATTGGTAAGCAAGAGTATGAAAAAGCTGCCAAATTACGTGATAAAGAGAAAACCTTGCGTGAGCAGTTACAACAA ATTCGAGCTGAATGGGAAATTAACAAAGAAGAGCATGAAGTCATTGTTGAGGATGAGGATGTAGCAAATGTGATAGCAAG GCAAACAGGAATACCTCTCAATCGATTAACTGAAGGTGAACTACAAAAAGTTCTCAAAATGGAAGAGATCTTAAAAGAAG GAATTATTGGCCAAGAAGACGCTATCAAAACAGTTTGCCGTGCCATTCGTCGAAGTAGAGCTGACATTAAAGATCCAAAT CGTCCTATTGGAGCTTTTCTCTTTTTAGGTCCTACAGGAGTTGGGAAGACACTTTTAGCTAGGCTTTTGGCAATTAACAT GTTCGGCGGCGAAGATGCACTCATTCAAGTCGATATGTCGGAATATATGGAAAAATTTGCCGTCAGTCGCATGACAGGTT CTCCTCCTGGCTATGTAGGGCATGAAGAAGGCGGACAGCTAACAGAACAAGTTAGACAGCGACCTTACTCAGTGGTCCTG TTTGATGAAATTGAGAAAGGACACCCTGATGTCATGGATCTTCTGTTACAAATACTTGAAGAAGGGCGTTTGACAGATTC TTTTGGAAGAAGAGTTGATTTCCGAAATACAATTATTATCATGACCTCTAACTTGGGGGCTGATCTTATTAAGAAAAGTA CTGAGATTGGTTTTGGAGCATCTGAAGGGTCGTTAGATTATATTCATATTAAGGAGAAAATTGAAAGCGAAGTCAAAAAA CGATTTAAACCTGAATTTCTTAACCGTTTGAATGACATCGTTATTTTCCATCCGCTTAATCGAGACAATTTATTGCATGT GATTTCTTTAGAAATTGAAAAACTTAGCAAACGTCTAGCTCGACGCGAAATATTTATCGAGCTTGATGATGCGGCTAAGA ATTTCTTGGTAGATAAAGGCTTCCAAGTAGAAATGGGAGCTCGTCCATTAAGACGTACCATTGAACAATTCTTAGAGGAT CCTTTAGCAGAGCGGATTTTGATGAATCCTAATGAAGGACGTCGTTGTCATGTGACAGTGGAAAACGAAGAGATTGTCAT TATTGACGATGAAATTTATCCTCTTCATGGAAAATCTACTACTGCTAGTTCTGCAATCAATTGA Protein sequence : MFDKFTNRAKQVIKLAKKEAQRLNHNYLGTEHVLLGLLKLGQGVAVNVLRNLNIDFETVRSEVEKLVGYGPEIQVYGDPA LTGKVKKVFEFANEEAANLNHNYVGTEHLLLGLLRQTDGVAAQVLENLNVNLKEVRKEVLKELETFNLQLPPISGAGISP SNPSPGSGGKGSYEKVAAGTANDKMPALRAYGHDLTEMCREGKMDPVIGRKEEIERLILILCRRRKNNPVLVGEAGVGKT AIVEGLAQAIVKGDVPDTLRKKKLITLDLALMIAGTKYRGQFEERIKAVMDEIKKNGNVLLFIDELHTIVGAGAAEGAID ASNILKPALSRGELQCIGATTIDEYRKHIEKDAALERRFQKILVAPPSVDDTIEILYGLKPEYEKHHKVIFTNQAIRAAA VLSDRYIHGRFLPDKAIDLIDEAGAKLRISMMNQPQDISKYESEIEATRLAKEESIGKQEYEKAAKLRDKEKTLREQLQQ IRAEWEINKEEHEVIVEDEDVANVIARQTGIPLNRLTEGELQKVLKMEEILKEGIIGQEDAIKTVCRAIRRSRADIKDPN RPIGAFLFLGPTGVGKTLLARLLAINMFGGEDALIQVDMSEYMEKFAVSRMTGSPPGYVGHEEGGQLTEQVRQRPYSVVL FDEIEKGHPDVMDLLLQILEEGRLTDSFGRRVDFRNTIIIMTSNLGADLIKKSTEIGFGASEGSLDYIHIKEKIESEVKK RFKPEFLNRLNDIVIFHPLNRDNLLHVISLEIEKLSKRLARREIFIELDDAAKNFLVDKGFQVEMGARPLRRTIEQFLED PLAERILMNPNEGRRCHVTVENEEIVIIDDEIYPLHGKSTTASSAIN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 0.0 | 53 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpC | YP_008510.1 | endopeptidase ATP-binding chain clpC | VFG0079 | Protein | 0.0 | 53 |
| clpC | YP_008510.1 | endopeptidase ATP-binding chain clpC | VFG0080 | Protein | 2e-141 | 50 |
