|
Name : mutS (pc1221) Accession : YP_008220.1 Strain : Candidatus Protochlamydia amoebophila UWE25 Genome accession: NC_005861 Putative virulence/resistance : Virulence Product : DNA mismatch repair protein MutS Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0249 EC number : - Position : 1452876 - 1455452 bp Length : 2577 bp Strand : + Note : This protein performs the mismatch recognition step during the DNA repair process DNA sequence : TTGTTTATTTTTCAATTAAAAATAAGTTTATTTATGTCTGATTTTGAACAACATTCCCTTGATGAAAGTAAAATTTCACC CATGATGATGCAGTGGCACGCCTGTAAAAAAATGGCGGGCGATGCCATTTTATTTTTTCGGATGGGTGATTTTTATGAAG CTTTTTATGAAGACGCTCATCTGCTATCTAAGGAGTTGGAGCTGACATTGACTAAACGGCAAGAAATTCCCATGAGTGGA ATTCCTTTTCATACAAGTGAAGGATATATCGATAAACTTGTCGCTAAAGGATTTCGAGTTGCCATTGCAGAACAAATAGA AGATCCTAAAAAAACTAAAGGCTTAGTCAAGCGCGAAGTTGTTCGTGTTGTGTCTCCTGGAACAGTTATTAACTCCTCTC TTCTTTCCGACAAAAACAATAATTTTTTTGCTGCCTTAGTAAAAGTGGGGCAAATTTTTGGATTAGCTTTTTTAGATTTG ACGACTGGTGAATATTGGGTGAGTGAATTTACGCAAGAAAGAGAACTTTTAAATGAACTTTATCGTTTGCACCCTGCTGA ATTTTTAACTTCTGAAAAATTCAAAGAAAAACATGCTTCTTTGTTTGAAGAAATGCAACAAACATATTCTTTTTTAGTCA ATACATTAGAAGACTGGCAATTTGAGCATCAACAAGCACATGATTTCCTTATTAATCATTTCAAGGTTCAACGCTTAGAT GGTTTTGGACTAAGCGGAATGGTTGCAGCTATCAATGCCGCAGGAGCTTTATTAAATTATTTACAAGAAACACTGTGTCT ACCAATCCAACATATTCAAAGCATTCGTTGCTATTCTTCTTCCCAGTTTATGATGTTAGATCGAATGACACAGCGTAATC TGGAACTAACGCATTCTCTACAAGACGGAAGTAGACGTCATACATTGCTAGGTGTCATTGATCAAACGCAGACTCCTATG GGCGCTCGGCTCATGCATCATTGGGTTAAGCAACCTCTTTTAAAAGTTTCTGAGATTCATCAAAGGCAAAATGGAATCCA AGCTCTATTAAATCACGAACACATTGTAGATCAATTACAAAATCTATTCCTTCAAATTAAAGATATTGAACGCTTGATGA TGAAAGTCAGTGCTTGCTACGCTACGCCTCGGGACCTTATAGCTCTTCATTTTTCTTTTAAGCCCATTGCATTTATTAAA TCTCTTTTGTTAAACATTCCTTCAGAATGGATAAATGAGCACGCACAAAAACTTGATCCTCTATCTAAAATGAATGCATT AATATCCAATGCAATCGTAGAAGAGCCGCCTCTAAGACTTGGTGAAGGGAAAACGTTCCGACAAGGTTTTCATCGTGAAT TAGATGAATTGCGAGAAATCAGTCATGACAGTAAAGCTTGGATGGCTCGTTACCAAACTCAAATCAGAGAAGAAACCGGT ATTAAAACCCTGAAAGTAGGTTTTAATAAAATGTTTGGTTATTTTATCGAAGTCAGTCGTGGTCAAATAGATAAAATGCC TGATCACTTTATACGTCGACAAACCCTTGTTAATGCTGAACGGTATATCACACCTGAGTTAAAAGAATATGAAAGCAAAG TCTTAACAGCGGAAGAACGCATCAACTCTATTGAAAGTGAACTTTTTCACCAACTTCGTTTAGAAGTTGCTTCATATACT AAAAATGTATTAGAAGTCGCTCAAGCATTAGCTAAAATTGATTGTTTAATATCTTTAACCAATGTAGCAAAAAAGTATTG CTACACATGTCCTGTCATTGATGACAGCTCCATTCTTGTGATCGAAGAAGGAAGGCATCCAGTAATCGAGACAGTGTGCC GGCATGAAAAATTTATTCCCAATGACACGTATTTAGATGATCAAGCTAATCGATTGCTCTTAATCACAGGCCCTAACATG GCAGGAAAATCGACATATCTGAGACAAGTAGCTTTAATTGTCATTTTAGCTCAAATAGGTTCTTTCGTTCCAGCAGCTAA AGCTCACATAGGAATTATCGATAAAGTCTTTACACGAATAGGTGCTAGTGATGATTTATCTAGAGGACAGTCAACTTTTA TGGTTGAAATGACTGAAACGGCAAATATTTTAAACAATGCCACTTCTCAATCTCTCGTTATTTTAGATGAAATCGGTCGG GGAACAAGTACATATGACGGCATATCAATTGCTTGGTCTGTGGCAGAATATCTTCTAACAACAGAAAAAAGGATGGCTAA AACATTATTTGCAACTCATTACTGGGAACTTACAAAATTAGAAGAGAAGGTTCCAGGTGCTGTTAATTACAACGTTGCTG TTCATGAAGCGGACGATCACATTACATTTCTAAGAAAAATCATCAAAGGAGGAACTGACAAAAGCTATGGAATCCACGTT GCTCGCCTAGCTGGGCTTCCACAAGCCGTTTTAAACCGTTCTAAAGAAATTTTAGAACATTTGGAAGAAAATGCGAATCG TAAGAGCGCTTTTGAGCCTACCCGTTCAAAAAAGAGTATGGTTTCTAAAGTAAAAGTTCCTTCAACTGACTTTCAATTGA ACTTATTTCAATCATAA Protein sequence : MFIFQLKISLFMSDFEQHSLDESKISPMMMQWHACKKMAGDAILFFRMGDFYEAFYEDAHLLSKELELTLTKRQEIPMSG IPFHTSEGYIDKLVAKGFRVAIAEQIEDPKKTKGLVKREVVRVVSPGTVINSSLLSDKNNNFFAALVKVGQIFGLAFLDL TTGEYWVSEFTQERELLNELYRLHPAEFLTSEKFKEKHASLFEEMQQTYSFLVNTLEDWQFEHQQAHDFLINHFKVQRLD GFGLSGMVAAINAAGALLNYLQETLCLPIQHIQSIRCYSSSQFMMLDRMTQRNLELTHSLQDGSRRHTLLGVIDQTQTPM GARLMHHWVKQPLLKVSEIHQRQNGIQALLNHEHIVDQLQNLFLQIKDIERLMMKVSACYATPRDLIALHFSFKPIAFIK SLLLNIPSEWINEHAQKLDPLSKMNALISNAIVEEPPLRLGEGKTFRQGFHRELDELREISHDSKAWMARYQTQIREETG IKTLKVGFNKMFGYFIEVSRGQIDKMPDHFIRRQTLVNAERYITPELKEYESKVLTAEERINSIESELFHQLRLEVASYT KNVLEVAQALAKIDCLISLTNVAKKYCYTCPVIDDSSILVIEEGRHPVIETVCRHEKFIPNDTYLDDQANRLLLITGPNM AGKSTYLRQVALIVILAQIGSFVPAAKAHIGIIDKVFTRIGASDDLSRGQSTFMVEMTETANILNNATSQSLVILDEIGR GTSTYDGISIAWSVAEYLLTTEKRMAKTLFATHYWELTKLEEKVPGAVNYNVAVHEADDHITFLRKIIKGGTDKSYGIHV ARLAGLPQAVLNRSKEILEHLEENANRKSAFEPTRSKKSMVSKVKVPSTDFQLNLFQS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| mutS | AAA80578.1 | DNA mismatch repair protein | Virulence | SPI-1 | Protein | 8e-132 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| mutS | YP_008220.1 | DNA mismatch repair protein MutS | VFG0562 | Protein | 5e-146 | 43 |
