Gene Information

Name : pc1004 (pc1004)
Accession : YP_008003.1
Strain : Candidatus Protochlamydia amoebophila UWE25
Genome accession: NC_005861
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1195109 - 1195372 bp
Length : 264 bp
Strand : +
Note : -

DNA sequence :
ATGAAAAAAAGATTTTCAGAAGAACACATCATTCAAATACTCAAAGAAGTAGAAGCAGGCTCAGCAGTAGCTGAAGTTTG
TCGTAAATATAGCATAGCTCCCGCTACTTATTACTCATGGAAAGCCAAATTTGGTGGAATGAGTGTATCTGAGGCACAAA
GATTAAAAGCTCTAGAAGAAGAAAACAGGAAATTAAAAAGGCTTGTAGCTGATTATGCTCTTGATAATGTGGCTTTGAAG
GATCTTTTATCAAAAAAGTGGTAG

Protein sequence :
MKKRFSEEHIIQILKEVEAGSAVAEVCRKYSIAPATYYSWKAKFGGMSVSEAQRLKALEEENRKLKRLVADYALDNVALK
DLLSKKW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tnp AAL78293.1 putative truncated transposase Not tested Hrp PAI Protein 8e-19 57
XCV0438 YP_362169.1 ISRSO12 transposase (fragment) Not tested Hrp PAI Protein 1e-18 57
unnamed AAK01522.1 transposase A Not tested PAGI-1 Protein 2e-19 54
EXA9 ABD94680.1 IS407 transposase OrfA Not tested ExoU island A Protein 2e-19 54
unnamed ABR13351.1 insertion sequence IS407 OrfA Not tested PAGI-5 Protein 8e-20 54
unnamed ABR13539.1 insertion sequence IS407 OrfA Not tested PAGI-8 Protein 8e-20 54
trp1400A CAB46581.1 IS1400 transposase A Not tested HPI Protein 8e-20 52