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Name : pc1001 (pc1001) Accession : YP_008000.1 Strain : Candidatus Protochlamydia amoebophila UWE25 Genome accession: NC_005861 Putative virulence/resistance : Unknown Product : hypothetical protein Function : - COG functional category : L : Replication, recombination and repair COG ID : COG2963 EC number : - Position : 1192289 - 1192666 bp Length : 378 bp Strand : - Note : - DNA sequence : ATGACTAATTGTAAATTAATTACATCAGTAGAAAGAAGAAGACGATGGTCCCTAGAAGAAAAAAAACAGATCATTGAAAA AACATATCAAGAAGGTCAATCTGTCTCCCAAATAGCAAGGAGATATGATATAACACCAAGTCAACTTTTTGCATGGAGAA GGCAGATGGAACAAGGAGCATTACAAGGAATTAGCAGCCGAGAAGAACTAGTTCCCAAAAGCCAAGTGAAAGAAATGGAA AAGCGAATAAGAGAACTAGAGCGGATGCTAGGGAAAAAGACATTTGAAAATGAAATTTTAAAAGAGGCTGTAAGGCTTGG GCAGGAAAAAAAACTCATCTTGCGGCAGCCATTGCCAAGCTTAAACGTTTTAGCATAA Protein sequence : MTNCKLITSVERRRRWSLEEKKQIIEKTYQEGQSVSQIARRYDITPSQLFAWRRQMEQGALQGISSREELVPKSQVKEME KRIRELERMLGKKTFENEILKEAVRLGQEKKLILRQPLPSLNVLA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| insC | YP_854262.1 | IS2 transposase | Not tested | PAI I APEC-O1 | Protein | 3e-14 | 45 |
| insC | AAZ04431.1 | IS2 conserved hypothetical protein | Not tested | PAI I APEC-O1 | Protein | 2e-14 | 45 |
| c5196 | NP_757044.1 | transposase insC | Not tested | PAI II CFT073 | Protein | 3e-14 | 45 |
| S3188 | NP_838471.2 | insertion sequence 2 OrfA protein | Not tested | SHI-1 | Protein | 7e-21 | 44 |
| S4060 | NP_839229.2 | insertion sequence 2 OrfA protein | Not tested | SHI-2 | Protein | 7e-21 | 44 |
| tnpG | AAD44740.1 | TnpG | Not tested | SHI-2 | Protein | 5e-21 | 44 |
| unnamed | AAL57520.1 | IS2 transposase | Not tested | LEE | Protein | 5e-21 | 44 |
| st02 | CAC81840.1 | ST02 protein | Not tested | LEE II | Protein | 5e-21 | 44 |
| ECO26_5247 | YP_003232129.1 | insertion sequence 2 OrfA protein | Not tested | LEE | Protein | 7e-21 | 44 |
| SF2984 | NP_708758.3 | IS2 ORF1 | Not tested | SHI-1 | Protein | 6e-21 | 44 |
| aec50 | AAW51733.1 | Aec50 | Not tested | AGI-3 | Protein | 5e-21 | 44 |
| S4049 | NP_839217.2 | insertion sequence 2 OrfA protein | Not tested | SHI-2 | Protein | 2e-20 | 43 |
| SF3709 | NP_709448.3 | IS2 ORF1 | Not tested | SHI-2 | Protein | 2e-20 | 43 |
| SF3722 | NP_709461.3 | IS2 ORF1 | Not tested | SHI-2 | Protein | 2e-20 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| pc1001 | YP_008000.1 | hypothetical protein | VFG0648 | Protein | 2e-21 | 44 |
| pc1001 | YP_008000.1 | hypothetical protein | VFG0622 | Protein | 6e-21 | 43 |
| pc1001 | YP_008000.1 | hypothetical protein | VFG0609 | Protein | 6e-21 | 43 |
