Gene Information

Name : TTC1978 (TTC1978)
Accession : YP_005947.1
Strain : Thermus thermophilus HB27
Genome accession: NC_005835
Putative virulence/resistance : Virulence
Product : two-component response regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 1883007 - 1883678 bp
Length : 672 bp
Strand : +
Note : -

DNA sequence : 
ATGGCCCGCGTGTTGCTCGTGGAGGACGACTCCCAGGTGGGGGAGCTGGTGCGCCGCTTCCTGGAACGGGAGGGGTTCGC
CGTGGCCTGGGTCCGCTTCGGAAGGGAGGCCCTAAAGCGGGTAGGGAAGGAGGGGGCGGACGTGGTGGTCCTGGACCGGG
GCCTGCCGGATATGGAGGGGTTGGAGGTCTTGAAGGGGCTCCGCTCCTTGGATCCCCTCCTTCCCGTCCTCCTCCTCACG
GGGCGCGCCGACGAGGAGAGCCGGGTGGAGGGGCTTCTGGAGGGGGCGGACGACTACCTGGGGAAGCCCTTTTCCCTGAG
GGAGCTCCTCGCCCGCATCAAGGCCCTCCTGCGCCGGGCGGGGAAGGAGGGGAGGAGGCGCTTCGGGCCCTTGGAGGTGG
ACCTGGAGGGGCGGCGGGCCTACCTGGAAGGGGAGCCTCTTCGGCTTTCCCCCACGGAGATGAACCTCCTTTTGGTCTTC
GCCCAGGCCCCGGGCCGGGTCTTCACCCGGGGAGAGCTCCTGGAGCGGGTCTGGGGCCCGGAGTTTGAGGGCTCGGAGCG
GGTGGTGGACGCCTACGTCCGCCTCCTCCGCAAGAAGCTCAGGGATGACCCCGAGGCTCCCCGCTTCATTGAGACGGTGG
TGGGGTTGGGGTACCGCTTCCTCGGGGATTGA

Protein sequence : 
MARVLLVEDDSQVGELVRRFLEREGFAVAWVRFGREALKRVGKEGADVVVLDRGLPDMEGLEVLKGLRSLDPLLPVLLLT
GRADEESRVEGLLEGADDYLGKPFSLRELLARIKALLRRAGKEGRRRFGPLEVDLEGRRAYLEGEPLRLSPTEMNLLLVF
AQAPGRVFTRGELLERVWGPEFEGSERVVDAYVRLLRKKLRDDPEAPRFIETVVGLGYRFLGD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42044.1 hypothetical protein Not tested PAI II 536 Protein 1e-20 41
c3565 NP_755440.1 response regulator Not tested PAI I CFT073 Protein 2e-20 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
TTC1978 YP_005947.1 two-component response regulator VFG1563 Protein 6e-21 41
TTC1978 YP_005947.1 two-component response regulator VFG1702 Protein 9e-21 41
TTC1978 YP_005947.1 two-component response regulator VFG1389 Protein 6e-22 41