Gene Information

Name : phoB (TTC1849)
Accession : YP_005818.1
Strain : Thermus thermophilus HB27
Genome accession: NC_005835
Putative virulence/resistance : Resistance
Product : phosphate regulon transcriptional regulatory protein phoB
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 1755863 - 1756534 bp
Length : 672 bp
Strand : +
Note : -

DNA sequence : 
GTGGCCACCCTGCTTCTGGTGGAGGACGAGCCCAGCCTGCGCCTGGGGTTGCGGCTGGCCCTCGAGGGGGCGGGGCACCG
GGTTTTGGAGGCGGCCACCGCGCAGGAGGCCTGGCCCCTCCTGCGGGAGGCGGAGCTCGTGGTCCTGGACTGGATGCTCC
CCGACGAGCCCGGGGTGCGCCTCCTGGACCGGATGCGCCAGGGCCCCTACGAGTCCCTCCCCGTCCTGATGCTCACGGCC
CGGGCCGGGGTGCGGGACCGGGTGGAGGGGCTTTCCCGCGGGGCCGACGACTACCTGGTGAAGCCCTTCGCCGTGGAGGA
GCTTCTGGCCCGCCTCGAGGCCCTCTTGCGCCGGGCGGGGAAGCGCAAGGTGCTGAGGCGGGGCCCCCTCCTCCTGGACC
TGGAGCGGATGGAGGCCCGCCTGGAAGGCAACCCCCTCCCCCTCACCCGGCGGGAGTTTGCCCTCCTCGCCTACCTGGCG
GAGCGGCCGGGCCGGGTCTGCACCCGGGAAGAGCTCCTGGAGGCGGTCTGGGGCCCGGACTACCTCGGCACCCCCAGGAC
CGTGGACCAGCACGTCCTCCAGCTCAGGGAGAAGCTCGGGGAGGACCCCAAGGCCCCCCGCTTCCTGGAGACGGTGCGGG
GCGTGGGGTACCGCTTCCGGGAGGAGGCGTGA

Protein sequence : 
MATLLLVEDEPSLRLGLRLALEGAGHRVLEAATAQEAWPLLREAELVVLDWMLPDEPGVRLLDRMRQGPYESLPVLMLTA
RAGVRDRVEGLSRGADDYLVKPFAVEELLARLEALLRRAGKRKVLRRGPLLLDLERMEARLEGNPLPLTRREFALLAYLA
ERPGRVCTREELLEAVWGPDYLGTPRTVDQHVLQLREKLGEDPKAPRFLETVRGVGYRFREEA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 1e-16 44
vanRB NP_815956.1 DNA-binding response regulator VanRB Not tested Not named Protein 2e-16 42
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 1e-17 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
phoB YP_005818.1 phosphate regulon transcriptional regulatory protein phoB EU250284.1.orf4.gene Protein 8e-26 44
phoB YP_005818.1 phosphate regulon transcriptional regulatory protein phoB BAC0197 Protein 5e-20 44
phoB YP_005818.1 phosphate regulon transcriptional regulatory protein phoB U35369.1.gene1.p01 Protein 7e-17 42
phoB YP_005818.1 phosphate regulon transcriptional regulatory protein phoB AE016830.1.gene2255. Protein 7e-17 42
phoB YP_005818.1 phosphate regulon transcriptional regulatory protein phoB NC_002516.2.879194.p Protein 4e-16 42
phoB YP_005818.1 phosphate regulon transcriptional regulatory protein phoB BAC0487 Protein 1e-17 41
phoB YP_005818.1 phosphate regulon transcriptional regulatory protein phoB HE999704.1.gene1528. Protein 6e-19 41
phoB YP_005818.1 phosphate regulon transcriptional regulatory protein phoB AF162694.1.orf4.gene Protein 2e-24 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
phoB YP_005818.1 phosphate regulon transcriptional regulatory protein phoB VFG0473 Protein 3e-20 45
phoB YP_005818.1 phosphate regulon transcriptional regulatory protein phoB VFG1390 Protein 7e-18 43
phoB YP_005818.1 phosphate regulon transcriptional regulatory protein phoB VFG1389 Protein 8e-21 42
phoB YP_005818.1 phosphate regulon transcriptional regulatory protein phoB VFG0596 Protein 4e-18 42