Gene Information

Name : TTC1360 (TTC1360)
Accession : YP_005329.1
Strain : Thermus thermophilus HB27
Genome accession: NC_005835
Putative virulence/resistance : Virulence
Product : transcriptional regulatory protein
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 1293866 - 1294543 bp
Length : 678 bp
Strand : +
Note : -

DNA sequence : 
ATGAAGGTCCTTTTGGTGGACGACGACCCGGCCATCCTCGAGGTCCTCGGGGCCTTTCTGAGGGGGGCCGGGTTTGAGGT
CTTGGAGGCGGAGGACGGGGAAAAGGCCTTGGAACTCTTTCCCCAGGCCGATCTGGTCATCCTGGACCTGATGCTCCCCA
AGGTGGGAGGCCTCGAGGTGGCCCGCCTCATCCGCCAGGAGCGCCCCGAGCTTCCCCTCCTCATCCTCACCGCCAAGGGG
GAGGAGGAGGACCGGGTCCTGGGCCTGGAGCTCGGGGCGGACGATTACGTGGTCAAGCCCTTCAGCCCCAGGGAGGTGGT
GGCCCGGGTCAAGGCCCTGTTGCGCCGGGCCGGGCTAAGGGAGGAGCTCGTCTACGGTCCCTTGCGCCTCCTCCCCACCC
GGCGGGAGGCCTACCTGGCGGGAAAGCCCCTCCCCCTCTCCCGGCTGGAGTTTGACCTCCTCTTAACCCTCGCCCAGCAC
CCGGGGGTGGTTTTCAGCCGGGAGAGGCTTTTGGAAAGGGTCTGGGGGCCCGGCTTTCCCGGGGTGGACCGGGTAGTGGA
CGTCCACATCGCCGCCCTTCGGAAGAAGCTCGGGGACGATCCGGAAAACCCCCGCTTCATTGAAACGGTGCGGGGCGTGG
GTTACCGCTTCAAGGACCCGGATGCGCCTCTTCCTTAA

Protein sequence : 
MKVLLVDDDPAILEVLGAFLRGAGFEVLEAEDGEKALELFPQADLVILDLMLPKVGGLEVARLIRQERPELPLLILTAKG
EEEDRVLGLELGADDYVVKPFSPREVVARVKALLRRAGLREELVYGPLRLLPTRREAYLAGKPLPLSRLEFDLLLTLAQH
PGVVFSRERLLERVWGPGFPGVDRVVDVHIAALRKKLGDDPENPRFIETVRGVGYRFKDPDAPLP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42044.1 hypothetical protein Not tested PAI II 536 Protein 7e-38 44
c3565 NP_755440.1 response regulator Not tested PAI I CFT073 Protein 2e-37 44
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 3e-20 42
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 6e-26 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
TTC1360 YP_005329.1 transcriptional regulatory protein NC_007793.3914279.p0 Protein 2e-42 48
TTC1360 YP_005329.1 transcriptional regulatory protein NC_002952.2859905.p0 Protein 3e-42 48
TTC1360 YP_005329.1 transcriptional regulatory protein NC_007622.3794472.p0 Protein 2e-42 48
TTC1360 YP_005329.1 transcriptional regulatory protein NC_002745.1124361.p0 Protein 2e-42 48
TTC1360 YP_005329.1 transcriptional regulatory protein NC_009782.5559369.p0 Protein 2e-42 48
TTC1360 YP_005329.1 transcriptional regulatory protein NC_002951.3237708.p0 Protein 2e-42 48
TTC1360 YP_005329.1 transcriptional regulatory protein NC_003923.1003749.p0 Protein 2e-42 48
TTC1360 YP_005329.1 transcriptional regulatory protein NC_002758.1121668.p0 Protein 2e-42 48
TTC1360 YP_005329.1 transcriptional regulatory protein NC_009641.5332272.p0 Protein 2e-42 48
TTC1360 YP_005329.1 transcriptional regulatory protein NC_013450.8614421.p0 Protein 2e-42 48
TTC1360 YP_005329.1 transcriptional regulatory protein NC_012469.1.7685629. Protein 2e-35 46
TTC1360 YP_005329.1 transcriptional regulatory protein HE999704.1.gene2815. Protein 4e-45 46
TTC1360 YP_005329.1 transcriptional regulatory protein AE016830.1.gene1681. Protein 2e-41 45
TTC1360 YP_005329.1 transcriptional regulatory protein NC_012469.1.7686381. Protein 5e-43 45
TTC1360 YP_005329.1 transcriptional regulatory protein AE000516.2.gene3505. Protein 4e-35 45
TTC1360 YP_005329.1 transcriptional regulatory protein BAC0197 Protein 1e-23 43
TTC1360 YP_005329.1 transcriptional regulatory protein CP001918.1.gene5135. Protein 3e-24 43
TTC1360 YP_005329.1 transcriptional regulatory protein CP000034.1.gene3834. Protein 2e-27 43
TTC1360 YP_005329.1 transcriptional regulatory protein CP000647.1.gene4257. Protein 6e-28 43
TTC1360 YP_005329.1 transcriptional regulatory protein CP001138.1.gene4273. Protein 5e-28 43
TTC1360 YP_005329.1 transcriptional regulatory protein NC_002695.1.915041.p Protein 2e-27 43
TTC1360 YP_005329.1 transcriptional regulatory protein BAC0533 Protein 6e-28 43
TTC1360 YP_005329.1 transcriptional regulatory protein CP004022.1.gene3215. Protein 6e-31 43
TTC1360 YP_005329.1 transcriptional regulatory protein BAC0596 Protein 2e-33 43
TTC1360 YP_005329.1 transcriptional regulatory protein CP001138.1.gene2239. Protein 2e-33 43
TTC1360 YP_005329.1 transcriptional regulatory protein CP000647.1.gene2531. Protein 6e-32 42
TTC1360 YP_005329.1 transcriptional regulatory protein BAC0039 Protein 4e-32 42
TTC1360 YP_005329.1 transcriptional regulatory protein CP000034.1.gene2186. Protein 4e-32 42
TTC1360 YP_005329.1 transcriptional regulatory protein NC_002695.1.916589.p Protein 3e-32 42
TTC1360 YP_005329.1 transcriptional regulatory protein BAC0347 Protein 1e-23 41
TTC1360 YP_005329.1 transcriptional regulatory protein CP000675.2.gene1535. Protein 9e-35 41
TTC1360 YP_005329.1 transcriptional regulatory protein CP001485.1.gene721.p Protein 7e-33 41
TTC1360 YP_005329.1 transcriptional regulatory protein CP001918.1.gene3444. Protein 2e-31 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
TTC1360 YP_005329.1 transcriptional regulatory protein VFG1563 Protein 4e-38 44
TTC1360 YP_005329.1 transcriptional regulatory protein VFG1702 Protein 7e-38 44
TTC1360 YP_005329.1 transcriptional regulatory protein VFG1389 Protein 9e-27 43
TTC1360 YP_005329.1 transcriptional regulatory protein VFG0596 Protein 2e-26 41