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Name : clpB (TTC1123) Accession : YP_005092.1 Strain : Thermus thermophilus HB27 Genome accession: NC_005835 Putative virulence/resistance : Virulence Product : endopeptidase Clp ATP-binding chain B, clpB Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 1089864 - 1092428 bp Length : 2565 bp Strand : - Note : - DNA sequence : ATGAACCTGGAACGCTGGACCCAAGCCGCCCGCGAAGCCCTGGCCCAGGCGCAGGTCCTGGCGCAAAGGATGAAGCACCA GGCCATAGACCTGCCCCACCTCTGGGCTGTCCTCCTGAAGGACGAGGGGGGCCTCGCCTGGCGCCTCTTGGAGAAGGCGG GGGCCGACCCCAAGGCCCTTAAAGAGCTCCAGGAGCGGGAGCTTTCCCGCCTGCCCAAGGTGGAAGGGGCCGAGGTGGGC CAGTACCTCACGAGCCGCCTCTCCGGGGCCTTGAACCGGGCCGAGGCCCTGATGGAGGAGCTCAAGGACCGCTACGTGGC GGTGGACACCCTGGTCCTGGCCTTGGCGGAGGCCACGCCGGGGCTTCCGGGCCTGGAGGCCCTGAAGGGGGCGCTCAAGG AACTGAGGGGAGGGAGAACCGTGCAGACGGAACACGCGGAAAGCACCTACAACGCTTTGGAGCAGTACGGCATTGACCTC ACGCGGCTTGCCGCCGAGGGGAAGCTGGACCCCGTGATCGGCCGGGACGAGGAGATCCGGCGGGTGATCCAGATCCTCCT CCGGCGCACCAAGAACAACCCGGTGCTCATCGGCGAGCCCGGCGTGGGGAAGACGGCCATCGTGGAGGGCCTGGCCCAGC GCATCGTCAAGGGGGACGTGCCCGAAGGCCTCAAGGGCAAGCGGATCGTCTCCTTGCAGATGGGCTCCCTCCTCGCCGGG GCCAAGTACCGGGGCGAGTTTGAGGAGCGCTTGAAGGCGGTGATCCAGGAGGTGGTCCAGTCCCAAGGGGAAGTCATCCT CTTCATTGACGAGCTCCACACCGTGGTGGGGGCGGGCAAGGCCGAGGGCGCCGTGGACGCGGGCAACATGCTGAAGCCCG CCCTGGCCCGGGGGGAGCTCAGGCTCATCGGGGCCACCACCCTGGACGAGTACCGGGAGATTGAGAAGGACCCCGCCCTG GAGCGCCGCTTCCAGCCCGTGTACGTGGACGAGCCCACGGTGGAGGAGACCATCTCTATCCTCCGGGGCCTCAAGGAGAA GTACGAGGTCCACCACGGGGTGCGCATCTCCGACAGCGCCATCATCGCCGCCGCCACCCTCTCCCACCGGTACATCACGG AAAGGCGCCTTCCCGACAAGGCCATTGACCTCATTGACGAGGCGGCGGCCCGCCTGCGCATGGCCCTGGAGAGCGCTCCC GAGGAGATTGACGCCCTGGAGCGCAAGAAGCTCCAGCTGGAGATTGAGCGGGAGGCCCTGAAGAAGGAGAAGGACCCGGA CTCCCAGGAGCGCCTCAAGGCCATTGAGGCCGAGATCGCCAAGCTCACGGAGGAGATCGCCAAGCTCCGGGCCGAGTGGG AGAGGGAGCGGGAGATCCTGAGGAAGCTCCGCGAGGCCCAGCACCGCCTGGACGAGGTCAGGCGGGAGATTGAGCTCGCC GAGCGGCAGTACGACCTGAACCGGGCCGCCGAGCTCCGCTACGGGGAGCTTCCCAAGCTGGAGGCCGAGGTGGAGGCCCT TTCGGAAAAGCTCCGGGGCGCCCGCTTCGTCCGCCTCGAGGTCACCGAGGAGGACATCGCCGAGATCGTCTCCCGCTGGA CCGGGATCCCTGTGTCCAAGCTCCTGGAAGGGGAGAGGGAGAAGCTTTTGAGGCTTGAGGAGGAGCTCCACAAGCGGGTG GTGGGGCAGGACGAGGCCATAAGGGCCGTGGCCGACGCCATCCGCCGGGCGAGGGCCGGCCTAAAGGACCCGAACCGGCC CATCGGAAGCTTCCTCTTCCTCGGGCCCACGGGGGTGGGGAAGACGGAGCTCGCCAAGACCCTGGCCGCCACCCTCTTTG ACACCGAGGAGGCCATGATCCGCATTGACATGACGGAGTACATGGAGAAGCACGCCGTCTCCCGCCTCATCGGGGCCCCG CCCGGCTACGTGGGCTACGAGGAGGGGGGCCAGCTCACCGAGGCGGTGCGGAGGAGGCCCTACTCGGTCATCCTCTTTGA CGAGATTGAGAAGGCCCACCCCGACGTCTTCAACATCCTCCTCCAGATCCTGGACGACGGCCGCCTCACCGACAGCCACG GCCGCACCGTGGACTTCCGCAACACCGTCATCATCCTCACCTCCAACCTGGGGAGCCCCTTGATCCTCGAGGGCCTCCAG AAGGGCTGGCCCTACGAGAGGATCCGGGACGAGGTCTTTAAGGTCTTGCAGCAGCACTTCCGCCCCGAGTTCCTGAACCG CCTGGACGAGATCGTGGTCTTCCGGCCCCTCACCAAGGAGCAGATCCGCCAGATCGTGGAGATCCAGCTCTCCTACCTCC GGGCCCGCCTCGCCGAGAAGCGCATCTCCCTGGAGCTCACCGAGGCCGCCAAGGACTTCCTGGCGGAAAGGGGCTACGAC CCCGTCTTCGGGGCAAGGCCCTTGCGGCGGGTCATCCAGCGGGAGCTGGAGACGCCCCTCGCCCAGAAGATCCTGGCCGG CGAGGTCAAGGAGGGGGACCGCGTGCAGGTGGACGTGGGGCCCGCGGGCCTCGTGTTTGCCGTCCCCGCCCGGGTGGAGG CCTGA Protein sequence : MNLERWTQAAREALAQAQVLAQRMKHQAIDLPHLWAVLLKDEGGLAWRLLEKAGADPKALKELQERELSRLPKVEGAEVG QYLTSRLSGALNRAEALMEELKDRYVAVDTLVLALAEATPGLPGLEALKGALKELRGGRTVQTEHAESTYNALEQYGIDL TRLAAEGKLDPVIGRDEEIRRVIQILLRRTKNNPVLIGEPGVGKTAIVEGLAQRIVKGDVPEGLKGKRIVSLQMGSLLAG AKYRGEFEERLKAVIQEVVQSQGEVILFIDELHTVVGAGKAEGAVDAGNMLKPALARGELRLIGATTLDEYREIEKDPAL ERRFQPVYVDEPTVEETISILRGLKEKYEVHHGVRISDSAIIAAATLSHRYITERRLPDKAIDLIDEAAARLRMALESAP EEIDALERKKLQLEIEREALKKEKDPDSQERLKAIEAEIAKLTEEIAKLRAEWEREREILRKLREAQHRLDEVRREIELA ERQYDLNRAAELRYGELPKLEAEVEALSEKLRGARFVRLEVTEEDIAEIVSRWTGIPVSKLLEGEREKLLRLEEELHKRV VGQDEAIRAVADAIRRARAGLKDPNRPIGSFLFLGPTGVGKTELAKTLAATLFDTEEAMIRIDMTEYMEKHAVSRLIGAP PGYVGYEEGGQLTEAVRRRPYSVILFDEIEKAHPDVFNILLQILDDGRLTDSHGRTVDFRNTVIILTSNLGSPLILEGLQ KGWPYERIRDEVFKVLQQHFRPEFLNRLDEIVVFRPLTKEQIRQIVEIQLSYLRARLAEKRISLELTEAAKDFLAERGYD PVFGARPLRRVIQRELETPLAQKILAGEVKEGDRVQVDVGPAGLVFAVPARVEA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 4e-97 | 44 |
| aec27 | YP_851418.1 | ATPase | Not tested | PAI II APEC-O1 | Protein | 5e-99 | 43 |
| aec27 | AAQ96721.1 | Aec27 | Not tested | AGI-1 | Protein | 4e-99 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpB | YP_005092.1 | endopeptidase Clp ATP-binding chain B, clpB | VFG2084 | Protein | 9e-98 | 41 |
