Gene Information

Name : rplS (LIC11559)
Accession : YP_001518.1
Strain :
Genome accession: NC_005823
Putative virulence/resistance : Unknown
Product : 50S ribosomal protein L19
Function : -
COG functional category : J : Translation, ribosomal structure and biogenesis
COG ID : COG0335
EC number : -
Position : 1920964 - 1921380 bp
Length : 417 bp
Strand : +
Note : this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site

DNA sequence :
ATGAATCAACTTTTAAGAGAAGTGCTGACTCCGGATGCTGAAAGAACACAAAATTTTACGGTAGGAGATACCGTTAAAGT
ACATTATAAAATTGTTGAGTCCGGAAAAGAAAGGGTTCAGATTTACGAAGGAGTTGTAATTTCCGTTGCAAATGAAGCCA
ACGGAAAAACTTTTACCGTTCGTAGAGTTTCCTACGACGTAGGTGTAGAAAGAATTTTCCCTTTGTTTTCTCCTAAAATT
GCAAAGATAGAATTGATTCGTAAAGGTAAAGTAAGAAGAGCAAAACTTTACTACTTGAGAAACCTTGCTGGAAAAGCGGC
ACGTATTAAAGAACTCAAAGGTGGTAAAGCTCTTGTAAGTGAAGACAGAAAGAGACAACAAGCTGCTGCGGCTACAAAAT
CTACGACGACGGAATAA

Protein sequence :
MNQLLREVLTPDAERTQNFTVGDTVKVHYKIVESGKERVQIYEGVVISVANEANGKTFTVRRVSYDVGVERIFPLFSPKI
AKIELIRKGKVRRAKLYYLRNLAGKAARIKELKGGKALVSEDRKRQQAAAATKSTTTE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rplS CAA68924.1 ribosomal protein L19 Not tested Internalin Protein 2e-27 57
rplS AAS66827.1 50S ribosomal subunit protein Not tested SSR-1 Protein 9e-19 45