Gene Information

Name : caf1M (YP_pMT084)
Accession : NP_995525.1
Strain :
Genome accession: NC_005815
Putative virulence/resistance : Virulence
Product : putative F1 chaperone protein
Function : -
COG functional category : N : Cell motility
COG ID : COG3121
EC number : -
Position : 76459 - 77268 bp
Length : 810 bp
Strand : -
Note : Best Blastp hit = pir||T15013 F1 capsule protein Yersinia pestis plasmid pMT01 gb|AAC82756.1| (AF074611) F1 capsule [Yersinia pestis]. Indentical to putative F1 chaperone protein from Yersinia pestis plasmid pMT01 ref|NP_395428.1| (NC_003134) putative F1

DNA sequence : 
GTGTTGTCACCATTCCGTAAGGAGGTTAAGCTCATGATTTTAAATAGATTAAGTACGTTAGGAATTATTACTTTCGGCAT
GCTTAGTTTTGCTGCGAACTCTGCTCAACCAGATATCAAATTCGCAAGCAAAGAGTATGGCGTGACTATAGGTGAGAGTA
GGATCATATACCCGTTAGATGCTGCTGGCGTTATGGTCTCGGTGAAAAACACCCAAGATTATCCGGTTCTCATTCAGTCT
AGGATCTACGACGAGAATAAAGAAAAAGAATCAGAGGATCCTTTCGTGGTCACTCCGCCATTGTTTCGATTGGATGCTAA
GCAACAAAATTCTTTGCGTATAGCTCAGGCTGGAGGTGTTTTCCCGCGAGATAAAGAGAGCCTAAAGTGGTTATGCGTAA
AAGGGATTCCACCAAAGGATGAAGATATATGGGTTGATGATGCGACAAATAAGCAAAAATTCAATCCAGACAAAGATGTG
GGAGTGTTCGTGCAATTCGCAATTAATAATTGCATTAAGCTTTTGGTTCGACCGAATGAATTAAAAGGAACCCCTATACA
GTTTGCTGAAAACTTAAGCTGGAAAGTTGATGGGGGGAAGCTAATTGCTGAAAACCCCTCACCTTTCTACATGAACATAG
GTGAATTAACATTTGGAGGGAAAAGTATTCCTTCTCACTATATTCCACCTAAATCGACGTGGGCTTTTGATTTGCCAAAA
GGACTAGCGGGAGCACGTAATGTTTCGTGGAGAATAATTAATGATCAGGGAGGGTTGGATCGTTTGTATTCCAAAAATGT
GACTTTATGA

Protein sequence : 
MLSPFRKEVKLMILNRLSTLGIITFGMLSFAANSAQPDIKFASKEYGVTIGESRIIYPLDAAGVMVSVKNTQDYPVLIQS
RIYDENKEKESEDPFVVTPPLFRLDAKQQNSLRIAQAGGVFPRDKESLKWLCVKGIPPKDEDIWVDDATNKQKFNPDKDV
GVFVQFAINNCIKLLVRPNELKGTPIQFAENLSWKVDGGKLIAENPSPFYMNIGELTFGGKSIPSHYIPPKSTWAFDLPK
GLAGARNVSWRIINDQGGLDRLYSKNVTL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
afaB AAK16197.1 AfaB Virulence PAI-I AL862 Protein 5e-49 42
afaB ADD91742.1 putative AfaB-VIII periplasmic chaperone Not tested PAI-I AL862 Protein 5e-49 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
caf1M NP_995525.1 putative F1 chaperone protein VFG0420 Protein 1e-118 100
caf1M NP_995525.1 putative F1 chaperone protein VFG0943 Protein 9e-44 43