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Name : virB4 (YP_pCRY09) Accession : NP_995423.1 Strain : Genome accession: NC_005814 Putative virulence/resistance : Resistance Product : type IV secretory pathway VirB4 component Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG3451 EC number : - Position : 4670 - 7354 bp Length : 2685 bp Strand : + Note : Best Blastp hit = gi|12053569|emb|CAC20141.1| (AJ006342) Pilx4 protein [Escherichia coli], len: 815aa; ref|NP_699273.1| (NC_004311) type IV secretion system protein VirB4 [Brucella suis1330], len: 831aa; match to COG3451, Type IV secretory pathway, VirB4 DNA sequence : ATGGTGCCCCTGCTGGCTGTCACAGGTGTAACCATCATCGTTGCTATCTGGACTTCCGTCGCTCTCCTGTTCTTACTTCC TGTGGAATTTCTGGTGATGAAATCCCTTACCAGAAATGAACCGATGCGGTTCAATCTGATTGCCGTATGGCTGAGAGCGA AGGGAAAGCCGGTAGCAAACCGTTTATTTGGCGCAACAACATTTATGCCCGTTGAGCATGATGATGTTGATATCAAGGAG TTTCTCGACGCCATGAAACTAAATCAGTGTGCCACCATCAAGAAGTACATCCCGTACTCATCGCACATTCATCAGCATGT GGTTCGTTCCCCTAAGAGCGATCTGTACTGCACCTGGGAATTGATGGGGACGCCGTTCGACTGCGAGTCTGACGAATCGC TCCAGTTCGGGACGAACCAGTTACACGGGTTAATCCGCTCATTCGAAGGTATGCCCGTCACTTTCTATATCCATAACGAC CGCAATACGTTTACCGACAATCTTCATCAAGATTCAGGCAACCCGTATGCCGATGAAGTTAGCCGTCTTTACTACGCCTC TGTTGGCTCGTTCCGGCGTAACCGCCTGTTTTTGACGGTCTGCTATCGCCCGTTCGTCAGCCTTGAAAAAGCGGAACGCA AACGGATGAAAGACCGCCAGAAACTTAAGGAACTGGACGGTGCATTGCTGGAAATGCTGGAAATCAAAAGCACGCTCGAT ACCGCGCTGGCGCGCTATGGTGCTCGTTCTCTCGGCACGTTTACCGAAGGAAACATGGTGTTTTCGTCACAACTGGCATT CTATGAATACCTGTTAACTCACCAGTGGCGAAAAGTTCGCGTCACCCGCACCCCGGCCTATGACGTGATGGGCGCGGCGG CGTTGTTCTTTTCGGCGGAGTCAGGGCAGATAAACCACGCAAACGGTACGCAATATTTCCGGGGGCTGGAGATTAAGGAG TTCTCCGAAGAAACCGCCACGGGGATGATGGACTCCCTTCTTTACGCCCCCTGCGATTATGTGATTACGCAGTCCTATAC CTGCATGTCACGCGAGGAAGCGAAAAAAGCCATTAAGCGTACCCGTCGCCTTTTGATGAGTGCCGACGACGATGCAGTTT CCCAGCGGCTGGATCTGGATGTGGCGCTTGACCTGCTGACATCGGGGAAAATCGCTTATGGAAAGCACCATTTTTCCATC ATGGTGTATTCCCCGTCGCTGGAAAGCCTGGTTGCAGATACTAACGAAATCAGTAACGCGCTGAACAACATCGGGATAAC GCCTGTTCCGGCAGAAATATCGCTTTCAGCGGCGTATATGGCGCAACTGCCAGGCAACTACAACCTGCGGCCACGTAAAG GGGAACTGAGTAGCCAGAACTTTGTGGAGCTGGCCGCACTCCATAATTTCTATCCGGGCAAGCGCGATAAAGCCCCCTGG GGGTATGCAATGGCTTTGATGCGCACCCCGTCAGGTGACGGCTACTATATCAACCTGCATAACACACTGGCAGATAAAGA CGAATTCAACGAGAAGAACCCGGCCAGTACCTGCATCCTCGGTACGAACGGTTCTGGTAAAACCATGTTGATGACGTTCT TTGAGATCATGCAGCAGAAATACGGGCGCGAGGATAGCTTCTCCCCGGATGCCAAAACCAAACGGCTGACAACCGTTTAT CTCGATAAAGACCGGGGCGCGGAGATAAACATCCGGGCGCTGGGTGGCCGTTACTATCGGGTTATCAGTGGCGAGCCTAC AGGGTGGAATCCGTTCTCACTGCCTGCAACCAAACGCAATATTAACTTCATCAAACAACTGGTGAAAATCCTTTGCACCC GTAACGGCGCAACCATCACTCCCCGTGATGAACGCCGTCTGAACGACGCGGTTAATGCCGTCATGAGCGATGAGCCAGAG TATCGCCGTTTTGGTATTACCCGACTCAGGGAACAGCTACCGGAACCAGCCACAAAGGAAGCCCAGGAAAATGGCCTGGA TATCCGGTTGTCACAGTGGGCGCAGGGCGGTGAGTTCGGCTGGGTGTTTGATAACGAATCTGACACGTTCGATATAAGCA ACTGCGATAACTTCGGCATCGATGGAACGGAGTTCCTGGACGATGCAAGCGTATGTGCGCCAATCTCGTTTTACCTGCTG TACCGCATTACCAGCCTGCTTGACGGGCGACGCCTGGTCATTTTCATGGATGAGTTCTGGAAGTGGTTACGCGATCCGGT GTTTAAGGACTTTGCTTATAACAAGCTGAAAACCATACGTAAGCTGAACGGGATGCTGGTTGTCGGTACTCAATCCCCGG CAGAGATCATCAAAGATGATATCGCCCCGGCAGTGATTGAGCAGTGCGGGACACAGATTCTGGCGGCGAACCCCAACGCC GACCGCGCACACTATGTTGACGGCATGAAGTTTGAACCGGAAGTGTTCGACGTGGTGAAAGGGCTTGATCCGCAAGCCCG CCAGTATGTTGTGGTGAAAAATCAGTTCAAGCGCGGCGATACCAAACGTTTTGCCGCTCGTGTCACGCTCGACCTGTCGG GTATCGGCAGATACACCAAAGTCATGAGCGGCGATGCCCCCAACCTCGAAATATTCGAATCGATTTACCGGGAAGGAATG CAGCCTCATGAATGGCTCGATACCTACCTGGCTAAAGCGCTCTGA Protein sequence : MVPLLAVTGVTIIVAIWTSVALLFLLPVEFLVMKSLTRNEPMRFNLIAVWLRAKGKPVANRLFGATTFMPVEHDDVDIKE FLDAMKLNQCATIKKYIPYSSHIHQHVVRSPKSDLYCTWELMGTPFDCESDESLQFGTNQLHGLIRSFEGMPVTFYIHND RNTFTDNLHQDSGNPYADEVSRLYYASVGSFRRNRLFLTVCYRPFVSLEKAERKRMKDRQKLKELDGALLEMLEIKSTLD TALARYGARSLGTFTEGNMVFSSQLAFYEYLLTHQWRKVRVTRTPAYDVMGAAALFFSAESGQINHANGTQYFRGLEIKE FSEETATGMMDSLLYAPCDYVITQSYTCMSREEAKKAIKRTRRLLMSADDDAVSQRLDLDVALDLLTSGKIAYGKHHFSI MVYSPSLESLVADTNEISNALNNIGITPVPAEISLSAAYMAQLPGNYNLRPRKGELSSQNFVELAALHNFYPGKRDKAPW GYAMALMRTPSGDGYYINLHNTLADKDEFNEKNPASTCILGTNGSGKTMLMTFFEIMQQKYGREDSFSPDAKTKRLTTVY LDKDRGAEINIRALGGRYYRVISGEPTGWNPFSLPATKRNINFIKQLVKILCTRNGATITPRDERRLNDAVNAVMSDEPE YRRFGITRLREQLPEPATKEAQENGLDIRLSQWAQGGEFGWVFDNESDTFDISNCDNFGIDGTEFLDDASVCAPISFYLL YRITSLLDGRRLVIFMDEFWKWLRDPVFKDFAYNKLKTIRKLNGMLVVGTQSPAEIIKDDIAPAVIEQCGTQILAANPNA DRAHYVDGMKFEPEVFDVVKGLDPQARQYVVVKNQFKRGDTKRFAARVTLDLSGIGRYTKVMSGDAPNLEIFESIYREGM QPHEWLDTYLAKAL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAP70302.1 | Pilx3-4/VirB3-4-like protein | Not tested | HPI | Protein | 0.0 | 98 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| virB4 | NP_995423.1 | type IV secretory pathway VirB4 component | BAC0398 | Protein | 0.0 | 57 |
