Gene Information

Name : virB1 (YP_pCRY07)
Accession : NP_995421.1
Strain :
Genome accession: NC_005814
Putative virulence/resistance : Resistance
Product : type IV secretory pathway VirB1 component
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3591 - 4301 bp
Length : 711 bp
Strand : +
Note : Best Blastp hit = gi|12053566|emb|CAC20138.1| (AJ006342) Pilx1 protein [Escherichia coli], len: 214aa; ref|NP_699276.1| (NC_004311) type IV secretion system protein VirB1 [Brucella suis1330], len: 238aa; match to COG0741, Soluble lytic murein transglycosy

DNA sequence : 
ATGCTTTCCACCACTGCTTTTCTGGCGGTGGCTATGCAGTGTGCCGCCACCGTTCACCCTTCTACGTCCCTCGATGTGGC
AAGGGTGGAGTCCGGTTATAACCCCTATGCCATCGCTGAGATCGTGCCTAAGCCCGAACGAAAACCCGGCGATAAAGGCT
TTATTACTCACATGCCAAAAAGTAAGGAGGATGCAGTCAGCATCACTAATCAGATTGAGGCGAAAGGTCGCCGCTACTCT
GTTGGCCTGATGCAGATAACCAGCACCAATTTTAAGCGTTACGGCGTCACCGCTACTGACCTTTTCAATCCCTGCATCAA
TCTTTCCGTCTACGAAAAAATCATCACCGACTGCTACCAGCGGGGCGGCACCCTGAAAAGGGCGTTGAGCTGCTACTACT
CCGGCAATTTCAGTACCGGACAACAGCAGGAACCCGCTTTTTCAAAGACGAGCTATGTACAGCGGATTGGCTACTCCCCG
GCGGATACCCACTATGCCGTTCCCGGCACCCGCGATGATATCGCAACCCCAGCGGCCACCCTGAAAGCTACGCCAGTGGA
CGCGCCCACGCGCCCACGCGTGGTGTGGCCGGGGGCGATCGTTCGCGGCGTTCCGGCTCAACTCCGCCAGAAAAAGGCGG
CCACCGTCTATTACCCCGCGCAAGTTGTGCGCGGAAATCGCGATGTAACAACGAAAGAGGAAGAAAAATGA

Protein sequence : 
MLSTTAFLAVAMQCAATVHPSTSLDVARVESGYNPYAIAEIVPKPERKPGDKGFITHMPKSKEDAVSITNQIEAKGRRYS
VGLMQITSTNFKRYGVTATDLFNPCINLSVYEKIITDCYQRGGTLKRALSCYYSGNFSTGQQQEPAFSKTSYVQRIGYSP
ADTHYAVPGTRDDIATPAATLKATPVDAPTRPRVVWPGAIVRGVPAQLRQKKAATVYYPAQVVRGNRDVTTKEEEK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAP70283.1 Pilx1/VirB1-like protein Not tested HPI Protein 1e-73 63

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
virB1 NP_995421.1 type IV secretory pathway VirB1 component BAC0396 Protein 1e-51 54