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Name : virB6 (YP_pCRY12) Accession : NP_995426.1 Strain : Genome accession: NC_005814 Putative virulence/resistance : Unknown Product : type IV secretory pathway VirB6 component Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG3704 EC number : - Position : 8328 - 9401 bp Length : 1074 bp Strand : + Note : Best Blastp hit = gi|12053572|emb|CAC20144.1| (AJ006342) Pilx6 protein [Escherichia coli], len: 351aa; match to COG3704, Type IV secretory pathway, VirB6 components, [Cell motility protein secretion] DNA sequence : ATGTCCGGTGGTGTTTTTGTCGGTGTTGAAAAACACCTGATAGGAGGAATAACAGACGCCACAAAGGGATTAATGATGTC GTACTCTTCTATGATGATGGGGCTGGCAGCAGCGTCAGCCACCATCTACATCATGTGGCGGGGATACCAGACTCTGGCTG GTAAGCTCTCTACACCGATGGAAGACACGATGTGGGACATCATGAGGATGGCGATCATTCTGTCCTTTGTGGCTAATTTG GGTGGCTATCTCGATGGCGTTATCGACGCTGTTAATGGGTTAAAGGAGGGGTTTTCTGGCAGTGATAATATATGGCAACT ATTAGATAGCTTATGGAATAACGCAAAAGTATTAGGTAAAACATTACATGACATGGATAATTCTACATATATAAAAGATG AGGGAATGACCGCTCAATTTTATGTATGGCTTGGGATATTCGTCTTAATGATTATTACCGCGTTTGTTTCCATGATAGCG GAAGTCATGATCTTATTGTTGAGTATCACTGCACCTATATTTATATTTTGCTTAATGTATGGCTTTCTACGCCCCATGTT TAATAACTGGCTACAAAATATATTTGCAGCCATATTAACTATTCTCCTTTCCTCTTTATCATTAAGGATTGTAGTCAATT ATTTAAACTCAAGGCTTGCATTAGCAACTCAAGGTGCAGCCCAGGCAAATATTGTAGAACTAGGAGCACAAGTCTGTCTT GCTGGTATCTGTGCGGCAATATTGGTTTATCTCTCCGCAAAACTGGCCGCAGCACTGGCCGGGGCGAGTGCTACCGTATC CATGCAGGGGCTGGCCGCTGTAGGTATCGGTGCTGCTGCTTTTGGTGCCGGGAAGCTGGCCGGGGGAGCCGTTAAAGAAA CCAAACGTTCCGCCCAGGACAACATTCAGGGCTGGAAGGATGCGAATGCAGGTAAACCCGGCAAGCCCGGAGGTGAGTTA GGCTATAACGCTTCTAAAGCGCGTAAATACGCGATTGAGCAGATGATAGCCCGGAACGAAGCGCGGAGGCTGGCACAGTC GAGAGAATCCGCGGTTAAGAAGTTCAACAGCTAG Protein sequence : MSGGVFVGVEKHLIGGITDATKGLMMSYSSMMMGLAAASATIYIMWRGYQTLAGKLSTPMEDTMWDIMRMAIILSFVANL GGYLDGVIDAVNGLKEGFSGSDNIWQLLDSLWNNAKVLGKTLHDMDNSTYIKDEGMTAQFYVWLGIFVLMIITAFVSMIA EVMILLLSITAPIFIFCLMYGFLRPMFNNWLQNIFAAILTILLSSLSLRIVVNYLNSRLALATQGAAQANIVELGAQVCL AGICAAILVYLSAKLAAALAGASATVSMQGLAAVGIGAAAFGAGKLAGGAVKETKRSAQDNIQGWKDANAGKPGKPGGEL GYNASKARKYAIEQMIARNEARRLAQSRESAVKKFNS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAP70286.1 | Pilx6/VirB6-like protein | Not tested | HPI | Protein | 7e-113 | 92 |
