Gene Information

Name : tnpR (YP_pCD92)
Accession : NP_995411.1
Strain :
Genome accession: NC_005813
Putative virulence/resistance : Resistance
Product : putative resolvase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1961
EC number : -
Position : 63199 - 63834 bp
Length : 636 bp
Strand : -
Note : Best Blastp hit = gi|16082774|ref|NP_395220.1| (NC_003131) putative resolvase (183 aa) [Yersinia pestis] gi|11277978|pir||T43611 probable resolvase tnpR - Yersinia pestis plasmid pCD1, gi|2996270|gb|AAC62593.1| (AF053946) transposon gamma-delta resolvase

DNA sequence : 
ATGGTGCGGTTTGTGTGTCTATTTAATCGCTTTTTTGTTATAATAGACACCAGTTGTCCGATATTTGATTTAGGATACAT
TTTTATGCGACTTTTTGGTTACGCGCGGGTATCAACCAGTCAGCAATCCCTCGATATTCAGATCAAAACACTCAAAGACG
CGGGCGTGAAAGCAAATCGTATATTTACTGATAAGGCATCCGGCAGCTCTGCCGACAGGGAGGGGCTGGATCTGCTGCGT
ATGAAGGTGGAAGAAGGTGACGTCATTCTAGTGAAGAAGCTCGACCGTCTTGGCCGCGACACCGTCGACATGATCCAGTT
GATAAAAGAGTTTGACGCCCAGGGTGTGTCCATCCAGTTTATTGATGACGGAATCAGTACCGATGGGGAAATGGGTAAAA
TGGTTGTCACTATTCTATCAGCAGTGGCTCAAGCCGAACGACAGAGAATACTGGAGCGTACAAATGAAGGGAGAGAAGAG
GCTAAGCTAAAGGGGGTTAAATTCGGACGAAAGCGCAGAATCAACAGAAAGGAACTACTCGAATTGCATGAACAGGGGAT
GGGCGCGACAGAAATAGCCAAAAAAATGAATATAGCTCGTTCAACTATTTATAAAGTCATCAATGAATCACAATAA

Protein sequence : 
MVRFVCLFNRFFVIIDTSCPIFDLGYIFMRLFGYARVSTSQQSLDIQIKTLKDAGVKANRIFTDKASGSSADREGLDLLR
MKVEEGDVILVKKLDRLGRDTVDMIQLIKEFDAQGVSIQFIDDGISTDGEMGKMVVTILSAVAQAERQRILERTNEGREE
AKLKGVKFGRKRRINRKELLELHEQGMGATEIAKKMNIARSTIYKVINESQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tnpR AGK07036.1 Tn2 resolvase Not tested SGI1 Protein 1e-69 81
tnpR AGK07094.1 Tn2 resolvase Not tested SGI1 Protein 1e-69 81
tnpR ACK44544.1 Tn2 resolvase Not tested SGI1 Protein 1e-69 81
tnpR ACF06167.1 resolvase Not tested Tn5036-like Protein 2e-75 81
tpnR ADZ05795.1 resolvase Not tested AbaR17 Protein 3e-61 80
ABTW07_3873 YP_005797121.1 transposon Tn3 resolvase Not tested AbaR4e Protein 1e-62 79

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
tnpR NP_995411.1 putative resolvase GU371926.1.gene95.p0 Protein 1e-80 80