Gene Information

Name : YP_pCD89 (YP_pCD89)
Accession : NP_995408.1
Strain :
Genome accession: NC_005813
Putative virulence/resistance : Unknown
Product : putative transposase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 61882 - 62148 bp
Length : 267 bp
Strand : -
Note : Best Blastp hit = gi|16082776|ref|NP_395222.1| (NC_003131) putative transposase (88 aa) [Yersinia pestis] gi|22124418|ref|NP_667841.1| (NC_004088) putative transposase [Yersinia pestis KIM], gi|11354320|pir||T43610 probable IS1617 transposase - Yersinia p

DNA sequence :
ATGAAAAAGACGCGTTATACCGAAGAACAAATCGCTTTTGCACTCAAACAGGCTGAAACGGGTACTCGAGTGGAAGAAGT
CTGTAGGAAGATGGGCATTTCGGAAGCGACATTTTACAACTGGAAGAAGAAGTTTGGGGGAATGGGTGTCACGGAATTGC
GCCGTCTTCGGCAGCTTGAGGATGAGAATCAGCGCCTCAAACGTCTGGTGGCCGATCTGAGTCTGGATAAGGAAATGCTG
CAGGATGTCATCCGAAAAAAGTTCTGA

Protein sequence :
MKKTRYTEEQIAFALKQAETGTRVEEVCRKMGISEATFYNWKKKFGGMGVTELRRLRQLEDENQRLKRLVADLSLDKEML
QDVIRKKF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tnp AAL78293.1 putative truncated transposase Not tested Hrp PAI Protein 6e-27 70
XCV0438 YP_362169.1 ISRSO12 transposase (fragment) Not tested Hrp PAI Protein 9e-27 70
unnamed ABR13351.1 insertion sequence IS407 OrfA Not tested PAGI-5 Protein 5e-18 56
unnamed ABR13539.1 insertion sequence IS407 OrfA Not tested PAGI-8 Protein 5e-18 56
EXA9 ABD94680.1 IS407 transposase OrfA Not tested ExoU island A Protein 1e-17 55
unnamed AAK01522.1 transposase A Not tested PAGI-1 Protein 1e-17 55
trp1400A CAB46581.1 IS1400 transposase A Not tested HPI Protein 9e-20 53