|
Name : YP_pCD83 (YP_pCD83) Accession : NP_995403.1 Strain : Genome accession: NC_005813 Putative virulence/resistance : Unknown Product : IS1222-like transposase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG2801 EC number : - Position : 57782 - 58279 bp Length : 498 bp Strand : - Note : Best Blastp hit =gi|16082695|ref|NP_395141.1| (NC_003131) YPCD1.04, possible transposase remnant, len: 215 aa; similar to many e.g. TR:Q46612 (EMBL:X78 052) Enterobacter agglomerans IS1222 ORFB (276 aa). Truncated at N-terminus [Yersinia pestis], gi|58324 DNA sequence : ATGGATTTCGTCATGGACGCATTGGCCACCGGTCGCAGGATAAAGTGCCTTACCTGCGTGGACGACTACACGAAGGAATG CCTGACGGTCACTGTTGCCTTTGGGATTTCAGGCGTGCAGGTCACGCGTATTCTGGACAGCATTGCGCTGTTTCGCGGCT ATCCGGCGACGATAAGAACTGATCAGGGCCCGGAATTTACCTGCCGCGCGCTCGATCAATGGGCCTTTGAGCATGGCGTG GAACTGCGACTTATCCAGCCCGGCAAGCCGACACAGAACGGATTTATTGAGAGTTTTAACGGACGCTTTCGCGATGAATG CCTGAATGAGCACTGGTTCAGTGACGTCAGTCATGCCAGGAAAACCATCAGTGAATGGCGTCAGGATTATAATGAGTGCC GCCCGCACTCTACGCTGAATTATCAGACGCCGTCTGAATTTGCGGCGGCCTGGAGAAAGGGTAATTCTGATAGTGAAGGA TCCGACATTACTAAGTGA Protein sequence : MDFVMDALATGRRIKCLTCVDDYTKECLTVTVAFGISGVQVTRILDSIALFRGYPATIRTDQGPEFTCRALDQWAFEHGV ELRLIQPGKPTQNGFIESFNGRFRDECLNEHWFSDVSHARKTISEWRQDYNECRPHSTLNYQTPSEFAAAWRKGNSDSEG SDITK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAB46578.1 | IS1222-like transposase | Not tested | HPI | Protein | 4e-73 | 98 |
| aec48 | AAW51731.1 | Aec48 | Not tested | AGI-3 | Protein | 9e-48 | 87 |
| RS13 | AAP82958.1 | putative transposase | Not tested | PAPI-2 | Protein | 4e-42 | 62 |
