Gene Information

Name : yopT (YP_pCD67)
Accession : NP_995391.1
Strain :
Genome accession: NC_005813
Putative virulence/resistance : Virulence
Product : putative cytotoxic effector protein YopT
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 47155 - 48123 bp
Length : 969 bp
Strand : -
Note : Best Blastp hit =gi|16082709|ref|NP_395155.1| (NC_003131) putative cytotoxic effector protein (322 aa) [Yersinia pestis], gi|11354336|pir||T43601 yop targeted effector yopT - Yersinia pestis plasmid pCD1, gi|2996259|gb|AA C62582.1| (AF053946) unknown [Yer

DNA sequence : 
ATGAACAGTATTCACGGACACTACCATATTCAACTATCGAATTATTCTGCCGGTGAAAACCTTCAATCAGCTACCCTCAC
CGAAGGGGTGATTGGCGCACACCGAGTGAAAGTGGAAACAGCACTGTCACACTCAAACCTGCAGAAAAAGTTATCAGCCA
CCATAAAACATAACCAGTCAGGCCGTTCTATGCTGGATAGAAAGTTGACCAGCGACGGCAAAGCTAACCAACGCAGCAGC
TTTACCTTCAGTATGATTATGTATCGCATGATACATTTTGTACTCAGCACTCGTGTGCCCGCGGTGAGAGAGTCTGTTGC
AAATTACGGAGGTAACATCAATTTCAAGTTTGCTCAGACCAAAGGGGCTTTTCTTCATAAAATAATAAAACATTCAGACA
CTGCTAGCGGTGTCTGTGAGGCTTTATGTGCACATTGGATCAGGAGCCATGCACAAGGCCAAAGCTTATTTGACCAGCTC
TATGTTGGCGGGCGTAAGGGGAAATTCCAGATCGATACACTTTACTCAATTAAACAGTTGCAAATAGATGGTTGTAAAGC
AGACGTTGATCAAGATGAGGTAACACTAGATTGGTTCAAGAAAAATGGCATATCAGAACGTATGATTGAACGGCATTGCT
TACTGCGTCCAGTTGATGTTACTGGTACGACGGAATCAGAAGGGCTGGATCAATTATTAAACGCTATCCTTGATACTCAT
GGGATAGGTTACGGTTATAAAAAAATACATCTCTCAGGCCAAATGTCAGCCCACGCCATAGCGGCGTATGTCAACGAAAA
GAGTGGTGTTACTTTCTTCGATCCCAATTTCGGTGAATTCCACTTTTCTGATAAGGAAAAGTTCCGCAAATGGTTTACTA
ACTCATTCTGGGGTAATTCTATGTATCATTATCCTCTGGGGGTGGGGCAGCGTTTTAGAGTGTTAACATTTGACTCCAAG
GAGGTTTAA

Protein sequence : 
MNSIHGHYHIQLSNYSAGENLQSATLTEGVIGAHRVKVETALSHSNLQKKLSATIKHNQSGRSMLDRKLTSDGKANQRSS
FTFSMIMYRMIHFVLSTRVPAVRESVANYGGNINFKFAQTKGAFLHKIIKHSDTASGVCEALCAHWIRSHAQGQSLFDQL
YVGGRKGKFQIDTLYSIKQLQIDGCKADVDQDEVTLDWFKKNGISERMIERHCLLRPVDVTGTTESEGLDQLLNAILDTH
GIGYGYKKIHLSGQMSAHAIAAYVNEKSGVTFFDPNFGEFHFSDKEKFRKWFTNSFWGNSMYHYPLGVGQRFRVLTFDSK
EV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAO18078.1 putative type III secreted effector LopT Not tested TTSS locus Protein 4e-78 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
yopT NP_995391.1 putative cytotoxic effector protein YopT VFG0375 Protein 9e-152 100